Aphelocoma coerulescens (scrub jay): 138120234
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Entry
138120234 CDS
T10543
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
acoe01002
]
138120234 (RHBDL3)
Enzymes [BR:
acoe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
138120234 (RHBDL3)
Peptidases and inhibitors [BR:
acoe01002
]
Serine peptidases
Family S54: Rhomboid family
138120234 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_11
EF-hand_8
DUF5580_M
EF-hand_9
AIF-1
EH
Motif
Other DBs
NCBI-GeneID:
138120234
NCBI-ProteinID:
XP_068888831
LinkDB
All DBs
Position
18:complement(4212891..4278461)
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AA seq
407 aa
AA seq
DB search
MGDKLPEPHASPSPAVAASSEAEEIEVLDSEDVLPMAAEDHWKALFDQFDPDNTGYISTE
KFRSLLQRHSSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRR
LCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFF
LYNGVVLDRFVLQVSHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLV
GVPLEMVHGAARISFVYVAGVVAGSLAVSVADMRAPVVGSSGGVYALVSAHLANIVMNWS
GMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVII
LRNYEQRLQDQTLWWIFLSIYIIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaagctgccggagcctcacgccagcccttcccctgctgtggctgccagctcg
gaggcggaagaaatcgaggtgctggactccgaggatgtcctacctatggccgcagaggat
cactggaaagccctatttgatcagtttgatcctgacaacactggctacatcagcactgag
aagtttcgctcccttctccagagacacagctcggagctggatcctcacaagctggaggtc
ctgctagccctggcagacagcaactctgaggggaggatctgctaccaggatttcgtcaac
ctgatgagcaacaaaaggtcaaacagtttccgccaagccatcctccaggggaacaggagg
ctgtgcagcaaggccctgctggaggagacaggactgagcctctcacagaggctgatccgg
cacgtggcatatgagaccctgccacgggagattgaccgcaagtggtactacgacagctac
acctgctgccccccgccgtggttcatgatcaccatcactattgtagaggttgcctttttt
ctttacaatggagtggtcttagacagatttgtgctgcaagtcagccaccccttgtacctg
aagaatgcattactgtaccatccccagcttcgggcccaggcttggaggtacctaacctac
atattcatgcatgcagggatagaacaccttgggctcaatgttgtccttcagctcttggtt
ggggttcctctggaaatggtgcacggagctgcgaggatcagttttgtgtatgttgcagga
gttgtggcagggtccctggcagtgtcagtggctgacatgagagcacctgtggtgggctcc
tctggaggtgtgtatgctcttgtctctgctcacctggccaatattgtgatgaactggtca
ggaatgaagtgccaattcaaactgctgcgcatggctgttgccttgatctgtatgagcttt
gaatttggaagagctgtgtggctgcgattccacccctctgcttacccgccatgccctcac
cccagcttcatggctcacctgggaggggtgatggttggaatcacccttggtgtcatcatc
ctgaggaactatgagcagagactccaagatcagactttatggtggatcttcctttctatt
tacatcatttttgtcttgtttgccatcttctggaatatttttgcctacagtctgttggat
ctaaagctacctccccctccttga
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