Aphelocoma coerulescens (scrub jay): 138120290
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Entry
138120290 CDS
T10543
Symbol
PECAM1
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04148
Efferocytosis
acoe04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138120290 (PECAM1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138120290 (PECAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
acoe04090
]
138120290 (PECAM1)
00536 Glycosaminoglycan binding proteins [BR:
acoe00536
]
138120290 (PECAM1)
04091 Lectins [BR:
acoe04091
]
138120290 (PECAM1)
CD molecules [BR:
acoe04090
]
Proteins
138120290 (PECAM1)
Glycosaminoglycan binding proteins [BR:
acoe00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
138120290 (PECAM1)
Lectins [BR:
acoe04091
]
I-type lectins (Siglecs)
138120290 (PECAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
VEGFR1-3_N_Ig-like
Ig_C17orf99
Zwei_Ig_N
ICAM_N
ZK512_Ig
Motif
Other DBs
NCBI-GeneID:
138120290
NCBI-ProteinID:
XP_068888921
LinkDB
All DBs
Position
18:4046580..4090121
Genome browser
AA seq
876 aa
AA seq
DB search
MYLALLVIFLQCSELYAQGKVFTFNRVEIRVQPSVKVKNGAPMSIICHADISKNTDFQLK
HNFTIFKDRKLVFMTVSDKEDARYEIPVAKSSDTGDYECTVKADGKLSFSNSIYVWVAGM
TKPILTADKREVLEGEVVKLRCELPEEVPPLEFFFRKIKTNSAPKEKRVPERNQNFSEVE
YYVEEGDNILQFDCFGKRQVRSGWESSQHSNKTLVTVKEPFIKPTLITGPSSNVTEGDQI
EIECSTVVAQMRDIDIILQKNRTILNSVRDKKFLKYSTVATQEDSGEYLCKVEQGAVSKT
TKLNVFVSELFPKPTLSASMTKLDESKDLILSCSINGFRRANFSIVRKGSHEDILLKNSR
VLAMKVNVNDTGSYTCKAEIKGIVKESKPVRINVYAPVSKPTLSVVSGSPEVILGKPVQL
ICHSVMGTPPITFTFYKGDEVRKNVTNDTYAMFLDEDIGLNDNGGYKCDARNNHSSGVKT
SNILNVTVIVPIRNASLGSVPYGEVEVGSDTAFLCSVKEGSWPIDFKFFKKTDHEVLLHE
VREYSDRTIWHKKTMKRKDTGTYYCMASNRASMDVRSRPITIHVILAAWQKGVIAAFVLT
AIAGAGAIALWWFLHKKKKAKGPSMEMSGSALAPNLTSEKLTRQPSDGNYYSGSGYIEDN
ENHMKSTDESKGPDLESAEVDYTEVEVSTLDPHRAPEQKGTETVYSEIRKTNNGHFLLKM
MLLVHSWSFNELCLCCVSDPKLTEASDSLCTDLMCTGLSSSSLQDNNSRFLIRKLEIQQT
KCRASLYAAKSGKMNWSLGNNCSSETGNSKSPTATNSVLWKNKYIPVEGGMRNPHCIQRF
GTNLFEISSSNQDICSNTFLLLSLKLNTYILARISH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttgctcttctggtgattttcttgcagtgttcagaactttacgctcaggggaaa
gtttttactttcaacagagttgaaatcagggttcagccatctgtcaaagtgaagaatgga
gctccgatgtcaatcatctgccatgctgatattagcaaaaatactgatttccagctgaag
cataattttacaatttttaaggatagaaagcttgtgtttatgactgtatcagacaaagaa
gatgcacggtatgaaataccagtggccaaatcttcagatacaggagactatgaatgtact
gtgaaagcagatggaaagttgagtttcagtaactccatctacgtttgggtagcaggaatg
accaagccaatcctgactgctgacaaaagagaagttttagagggtgaagttgtgaaatta
cgttgtgagctgccagaagaagtacctcctttagagttctttttccggaagataaagaca
aactcagcacctaaagaaaaacgtgtacctgaacgaaaccaaaatttttctgaagtggaa
tattatgttgaagagggagataatattttacaatttgattgctttggcaagagacaagta
agatctggatgggaaagctcacaacatagcaacaaaactcttgttacagtcaaggaacca
tttataaagcccactctgatcactgggccctccagtaatgttacagaaggagaccaaata
gaaattgaatgctcaactgtggtagctcaaatgcgtgacattgacatcatcctccagaaa
aacagaacaatactgaacagtgtacgagataagaaatttttgaaatactctacagtagct
actcaagaggacagtggtgaatacctgtgtaaggtggagcaaggagcagtgtctaaaacc
acaaaactgaatgtctttgtgtcagagttatttcccaagccaacattgtctgcttctatg
acaaagctggatgaaagtaaagatttaattttgagttgcagcattaatggttttcggaga
gccaacttctctatagtgcggaaaggttcccatgaagacatcctgttgaaaaattctaga
gtcttagcaatgaaagttaatgtgaatgatactggatcttacacctgtaaagctgaaata
aaaggaatagtcaaggagagcaaacctgtaaggataaatgtttatgctccagtctccaag
ccaactctttccgttgtcagtggttcaccggaggtgatattagggaagcctgtacaatta
atctgtcattcagtgatgggaacaccaccaataacattcacattctacaaaggggatgaa
gttaggaaaaatgtaactaatgacacatatgctatgttcttggatgaagatattggacta
aatgacaatggaggatacaaatgtgatgctagaaacaatcactccagtggtgtgaaaact
agcaatattctaaatgtcacagtgatagtaccgatcaggaatgccagtttgggcagtgtt
ccgtatggagaagtagaagttggcagtgatactgcttttctctgctctgtgaaagaagga
tcttggccaatagacttcaagttttttaaaaaaactgatcatgaggttcttctacatgaa
gtaagggagtattcagacagaaccatatggcacaagaaaacaatgaagcggaaggacaca
gggacgtattattgcatggcttcgaaccgagccagcatggacgtgaggagccgtccaata
accatccatgtcatcttagcagcttggcagaaaggagtcattgctgcatttgtcctaaca
gccatcgcaggagcaggagccattgctttatggtggtttttgcataagaagaaaaaggct
aaaggaccatccatggagatgtctggttctgccttggctccaaacttgacaagtgaaaaa
ctaacgagacagcccagtgatggaaactattattcaggatcaggttacattgaagataac
gaaaatcacatgaaatcaacagatgagagtaaaggacctgaccttgagagtgctgaggtg
gattacactgaagttgaagtctcaacacttgatcctcacagagctcctgaacagaagggg
actgaaacagtttatagtgaaatcagaaaaactaataatggacacttcctgttgaagatg
atgttactggtacattcttggtccttcaatgaactctgtctttgctgtgtgtcagaccca
aagctcacagaagccagtgacagtctctgcactgatcttatgtgcactggactgagctca
tcatcattgcaagataacaattcccgatttcttattaggaaactggaaatccagcaaaca
aaatgcagagccagcctttatgctgctaagtctggaaaaatgaattggtcacttggaaac
aattgcagcagtgagacaggaaattctaaaagtcctacagcaaccaacagtgtactatgg
aaaaataaatatatcccagtggaaggaggcatgagaaatccccattgcattcagaggttt
ggaacaaacctatttgaaatcagctctagcaatcaggatatctgctcaaatactttcctg
ctactgagcctcaagcttaacacctacatcttagccagaatttcccactga
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