Aphelocoma coerulescens (scrub jay): 138120467
Help
Entry
138120467 CDS
T10543
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03020
RNA polymerase
acoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138120467 (POLR2J)
09124 Replication and repair
03420 Nucleotide excision repair
138120467 (POLR2J)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoe03021
]
138120467 (POLR2J)
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138120467 (POLR2J)
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
138120467 (POLR2J)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
138120467 (POLR2J)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
138120467
NCBI-ProteinID:
XP_068889289
LinkDB
All DBs
Position
19:complement(4969462..4971128)
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcctccggccttcgagtctttcctgctcttcgagggcgagaaaaagatcacc
atcaacaaggacacgaaggtgcccaacgcctgcttgttcaccatcaacaaggaggaccac
acgctggggaacatcatcaagtcgcagttgctcaaagacccgcaggtgttgtttgcaggg
tataaggtcccacaccctctggaacataaaattatcatccgtgtccaaaccacccctgac
tacagcccccaggaggctttcaccaatgccatcacggatctgatcagtgaactctccctc
ctggaagagaggttcagggttgctattaaggacaaacaagaaggaattgagtaa
DBGET
integrated database retrieval system
