Aphelocoma coerulescens (scrub jay): 138120653
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Entry
138120653 CDS
T10543
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1
KO
K04650
nuclear receptor co-repressor 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138120653 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
acoe01009
]
138120653 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138120653 (NCOR1)
Protein phosphatases and associated proteins [BR:
acoe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138120653 (NCOR1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
138120653 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
138120653
NCBI-ProteinID:
XP_068889584
LinkDB
All DBs
Position
19:complement(7580175..7634678)
Genome browser
AA seq
2534 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDS
HFQRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLS
KEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQ
IIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRN
HARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQE
RFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKF
INMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLY
YYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKSDKSEKKEEEKKDE
EEKDEKEESKENTKEKDKTEVAPEETEEREQAAPRGRKTANSQGRRKGRITRSMTNEAAQ
ANAAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVG
TKSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIE
ASNEEENPEDSEGAENSSDTESAPSPTPAEPAKPTEETPAETAAPKVTTEAPAEQESAIK
PATSTSPSLTAQSVSTAETQNPEPQVKEEINTEAEEPMEVDSRSHPAEAKPVITLPVHTK
VEPVETEMRLPENIQVKIESDTKEREMEKPKEKSEPEEMDYSLSQQVTTARQESHSDNDS
SATCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPP
MVSCSPCSVPMGTPVSGYALYQRHIKAMHESALMEEQRQRQEQLDMEYRSAVSPCGTSKS
PSVEWEGKPVAYMPYAEVKRIEQEAQVQNPATRSASPYRLSPREVNKASPQPEMNAARYS
VPPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTP
GTYLTTHSQASYAQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGL
LVRAQHESVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALSQSGIAADALL
KGTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEIGL
KRTYDTMEGNIKQGMSLRESPGSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRA
TAESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQE
SRKTPEMVQTTRPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMV
PENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARR
TPVNYQSPMSRSSPMMNRVSEAGISSGKPANHERKNTLTPTQRESVPAKSPVPGVDPVVA
HSPFDPHHRGATPEVYRGHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLY
AMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILV
PHPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREK
ERERERERERERERERERERERITSVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQEN
ILQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVD
AAASAPQMEVAKAKENKHEGARIEENMGRRSAVVTDQQQMEQKTLEVEKRPVQCPYTSAN
YSGGKSQGQTSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDK
DARDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPVPAQEKLQPYQQETPKPSQAETD
PNRPYEGPIHRYRTQQEPPSPQPPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFAR
NQAASQASLQPPTTTFQNSSPAPTPVSGRAKTSNRYSPESQSQPVHHQRPGARVSPENLS
DKARGRPGKSPERSHVPSEPYEPISPPQVPVVHEKQENVLLLSQRTEPSEQRTDSRSPGS
ISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAV
SSRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQPLAVAPGSSGAAVPASNET
RREEANPSPNSGGAVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQT
PVWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHPQNRIWEREPAP
LLSAQYETLSDSDD
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctccgaaccaaggagctttcagcacggagcagagccggtac
ccgccccactctgtgcagtacaccttccccagcacccgccaccagcaggaatttgctgtt
cccgactatcgctcgtctcacctggaagtcagtcaggcaacgcagctcctgcagcagcag
cagcagcagcagcagcagctccggcgcaggccctccctgctctccgagttccacccaggc
tctgacaggcctcaggaaaggagaactggatatgaacagcagtttcatccaggtccatct
cagacagatcatgattcactggaatctaagcgaccacgtcttgaacaagtgtctgattct
catttccagcgtgtcagtgcagccactgtcttgcctttagtacatcctctgcaggaaggg
ctgagatctgcagatattaagaaggacccagcttttggaggaaagcatgagggaccatct
tctccaatttctggtcagccttgtggggaggaccaaaatgcttcaccttccaagctgtca
aaggaagaattgatccagagcatggaccgcgtagatcgcgaaattgcgaaagtggaacag
caaatcctgaaactgaagaaaaagcaacaacaacttgaagaagaagctgctaagcctccc
gagcctgagaggcctgtgtcccctcctcccgtggagcagaagcaccgcagcattgtccag
atcatttacgatgagaatcggaaaaaagcagaagaagctcacaagatttttgaaggtctt
ggtcctaaagttgaattgccactttacaaccaaccatcagacaccaaggtctaccatgaa
aacatcaaaacaaaccaggtgatgaggaaaaagctgatcctattctttaaaagaaggaac
catgcaagaaaacaacgggaacagaaaatctgtcaacgttatgatcagctgatggaggca
tgggagaagaaggtagacaggatagaaaataatccacgcaggaaagccaaggagagcaaa
acacgggagtactatgagaaacaattcccagaaatccggaagcagagagaacagcaggaa
agattccaaagagttggccaaagaggggctggcctttcagcaacgattgctagaagtgaa
catgagatttcagaaatcatcgatggactctctgagcaggagaataacgagaagcaaatg
cggcagctctctgtcatccctcccatgatgttcgatgcagaacagagacgggtgaagttc
attaacatgaacgggctgatggaggatcccatgaaagtttataaagacaggcagttcatg
aacgtctggacagaccacgagaaagagatttttaaggagaagtttgtccaacatcccaag
aactttggtctaattgcttcctacttggaaagaaagaatgttcctgactgtgtattatat
tattatttgaccaagaaaaatgaaaattataaagcccttgtgcgaaggaattatggtaaa
cgcagaggaagaaaccagcaacaaattgctcgtccttctcaagaagaaaaggtagaagaa
aaggtagaagaggaaaaatcagacaaatcagagaaaaaagaggaggaaaagaaagatgag
gaggagaaggatgagaaggaggaatctaaagagaataccaaagaaaaggacaaaactgaa
gttgcaccagaagaaacagaggaaagggagcaggcggctcctcggggccgaaaaactgcc
aacagccaaggtcggcgtaagggcagaatcaccagatcaatgacaaatgaagctgctcaa
gcaaatgctgctgcagctgcagccactgaagaaccaccaccacctctgccacccccacca
gaaccttcttctaccgagcctgtggagacatcccgctggacagaagaagaaatggaagtt
gcaaagaaaggtctagtggaacatgggcgaaactgggcagcaattgccaaaatggttggg
acaaaaagtgaagctcagtgtaagaacttctacttcaactacaaaaggaggcacaacctg
gacagtctcctccaacagcacaaacagaagtcttcacgaaggccccgagaggagcgagat
gtgtcacagtgtgagagtgttgcttcaactgtgtcagctcaggaggatgaagatattgaa
gcatccaatgaagaagagaacccagaagacagtgaaggtgctgaaaatagttctgataca
gaaagtgctccatctccaactccagcagaacctgctaaaccaactgaagaaactccagct
gagactgctgctccaaaagtaaccactgaggccccagcagagcaggaatcagccattaaa
cctgcaaccagcacatctccctccttaacagctcaaagtgtatcaacagctgaaactcag
aaccccgagccacaggtcaaagaagaaataaacactgaggcagaagagcctatggaggtg
gacagtagaagccatccagctgaagctaagcctgtgattactcttccagttcataccaaa
gtagaacctgtagagactgaaatgaggctaccagagaatattcaagtgaaaatagagagt
gataccaaagagagagagatggagaagcccaaggaaaagtcagaaccggaggaaatggac
tatagcctgtcccagcaagttactacagccagacaagaatcccattcagataatgattcc
agtgccacctgtagtgctgatgaggaagttgatggagaacctgacagacagggtatcttc
agcagagagtcaaagccctcactgttaaatcccactgggtcaatactggtatcatccacg
ataaagcaagggcagatggacctgcaacagcttcaccaccgagctgctgtcatcccacct
atggtttcctgcagcccctgctctgtccccatgggcacccctgtgagtggttacgcgctc
taccagcggcacatcaaggccatgcacgagtcagccctgatggaggagcagcgccagcgc
caggagcagctggacatggaatatcggagtgctgtgagcccctgtggcacctccaagagc
cccagtgtggagtgggaaggaaaaccagtggcctatatgccttatgctgaggtcaagaga
atagaacaggaagcacaagtgcaaaatccagccacaaggtcagcatcaccctacaggtta
tcaccaagagaagtcaataaagcctctccccagcctgagatgaatgcagctcgctacagt
gtccctccagttctccagccagcccctcaccaggtgataaccaatattcccgaaggagtt
cgcctgcccacaaccagacccaccagaccaccaccaccactcattccatcctccaaaacc
agtgtgccatcagaaaaaccttctttcatcatgggaggctcaatctcacaaggaacacct
ggcacttatttaacaacccatagtcaagcttcctatgcccaagaaactgcaaagccatca
gtgggttctatatctctggggctgccaaggcagcaagagtcagctaaatctgcttccctg
ccctatatcaaacaagaagaattctcacccagaagccagaattcccaacctgagggactc
ctggtcagggcacagcatgaaagcgtggtgcgaggtaccacaacgatacaggagggaagt
ataacacgaggaactccaaccaataaagtttcagttgagaccattccttctttgagaggc
tccataactcagggtaccccagctctgtcccagtccggcatcgccgccgacgcgctgctg
aagggaaccatcacccggctggctacggaggacagcagcccagagaagtgcagagaggag
gcttcagccaagggccatgtcatttatgaaggcaaaagtgggcatattctatcttacgat
gctattaaaaatgtccgtgaaggaacaaggagtccgagaactgctcacgaaatcggatta
aagagaacatatgatacaatggaaggaaatataaagcaagggatgtcactgagggaatct
ccagggtctgcaccactggaaggtttaatctgccgagcgctgcctcggggtagcccacac
gctgaactaaaggagagaacagtcttgtctggctctataatgcaaggcaccccaagagca
acagctgaaagttttgaagaaggtttgaagtaccccaaacagatcaagagagagtcacct
cccatcaggacgtttgaaggagccatcaccaaggggaaaccatatgatggggtcaccacc
ataaaggaaatgggtcggtccatccatgagatcccaaggcaggacctgttaagccaagag
agtcgcaagactcctgaaatggtgcagacaaccaggccaatcatagaaggctccatatct
cagggcacacccataaaatatgaaagcaactctggccagtctgccatcaaacacaatgta
aaatctttaatcactggaccaagcaagctgccccggggaatgcctcagctggaaatggtg
ccagaaaacgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggatgcc
gtgcggtcccgtcacacgtccgtagtcagctctggtccctctgttctcaggtcaactctt
catgaaactcccaaatcacagctgagccctgggatttatgatgatacaaatgctcggagg
acacctgtgaactatcagagtccaatgtccaggagttcacctatgatgaatagagttagt
gaggctggaatatcttctgggaagccagcaaatcatgaaaggaagaacacactcactcca
acacagagggagagtgtgccagcaaaatctccagtcccaggggttgatcctgtagtggct
cacagtccttttgaccctcaccacagaggagcaactcctgaagtctacaggggtcacctc
cctcctcatttagatcctgctatgccatttcacagagctctggatcctgctgctgctgct
tacctgttccaaaggcagctgtcccccacgccagggtaccccagccagtaccagctgtac
gccatggagaacacgcgccagaccatcctcaacgactacatcacctcccagcagatgcaa
gtgaacctccggcccgatgtcaccaggggactgtcccccagggagcaaactttagctctc
ccttatgcaggagcacgaggaattattgacctgaacaatatggctcccactatcttagtg
cctcatcctggaggaacgagcaccccacccatggagagaatcacatatatccctggcacc
cagcttaccttccctcccaggccttacaatcctgcttctctgtcaccaggacaccccaca
cacctggcagcttctgcagctgcaaatgctgaaagggaacgggaaagggaaagggagaag
gaacgggaaagggagagggaacgtgaacgagagcgggaaagagaacgagaacgtgagagg
gagagaatcacctcagtccctgctgaactttatctccgaccaggtgcagagcagcctggc
agacccggcagtcacggatatgtccggtccccatccccctctgtcagaagccaggaaaac
attctgcagcaaaggccaagtattttccaaggaaccaatgggacaagtgtaatcacacct
ttggatcctgctgctcagctacgtatcatgcagctcacccctggagctccctctatcact
caaggcttgccagcttcccgttacaacactgctgctgatgccctggcagcactcgtggat
gctgcagcctctgctcctcagatggaagttgccaaagcaaaggagaacaagcatgaagga
gccaggatagaagagaacatgggacgccggtcagctgtggtgactgaccagcagcagatg
gagcagaagaccctggaggtagaaaagaggcctgtgcagtgcccctatacatctgcaaat
tactctggtggcaagtcccagggacagacttcatcagtagtctattcagaggctggtaaa
gagaaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagacc
acaattactgctgctaacttcatagatgtgatcatcactcgccagattgcttcagacaag
gatgctcgagataggggctctcaaagttcagattcttccagtagtttgtcctcacaccgg
tatgaagctcctggagatgccattgaggtgatcagccctgcaaattcacctgtacctgct
caagaaaagctacagccctatcaacaagagacccccaaaccaagccaggcagagactgac
cccaacaggccgtacgagggccccattcaccgctacaggacacaacaggagcccccctca
ccccaaccacctccacctccctcttcccaggcagaggggatggcacatgtgcccaggacc
catcggctcatcacccttgctgatcacatctgtcaaattatcacacaagactttgctaga
aaccaagcagcttctcaggcctctttgcagcctcccaccactacattccagaattccagc
cctgctccaacgcctgtttctggccgggcaaagacctcgaaccgctacagccccgagtcg
cagtcgcagcctgtgcaccaccagcgcccaggggccagagtgtcccctgagaacctctct
gacaaggccaggggaaggcctggaaaatctccagagaggagtcatgtcccttcagagccc
tacgagccaatctcaccacctcaggtcccggttgtacatgagaaacaggaaaatgttctt
ttgctttcccaaagaactgagcctagtgaacagaggactgactctcgctctccaggcagt
atcagttacctgccttcgtttttcaccaaacttgagaacacttcaccaatggtaaaatcc
aagaaacaggagatatttcgaaagctgaactcatctggtggaggtgactctgacatggca
actgctcagccagggactgaaatattcaatttgccagcagtcactacctcaggtgcagtc
agttctaggggtcactcctttgcagatcctgccagtaatctgggtctggaagacattatt
aggaaagcactgatgggaaactttgatgacaagagtgaggagcacggggtcgtaatgtcc
caacctcttgcggtggctccgggcagctccggcgccgcggtaccagcgagtaacgagaca
cggagggaagaagccaatccatctccaaattcaggtggggcagtcagcaagcagaagctc
attggcaagtcaaacagtaggaagtcaaagtctccaattcctgggcagggatatttggga
actgaaagaccatcttctgtctcatctgtacattcagaaggggactaccacagacagact
ccagtgtgggcctgggaagacaggccttcatcaacaggttccacccagtttccgtacaac
cctctgaccatgaggatgctgagcagcacccccccgacctccatcgcctgtgcccccccg
tccatgagccaagcaaccactcacccacagaacaggatctgggagcgagagcctgcacca
ctgctttcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
