Aphelocoma coerulescens (scrub jay): 138120659
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Entry
138120659 CDS
T10543
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04137
Mitophagy - animal
acoe04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138120659 (RABGEF1)
04137 Mitophagy - animal
138120659 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138120659 (RABGEF1)
Membrane trafficking [BR:
acoe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138120659 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
138120659 (RABGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
138120659
NCBI-ProteinID:
XP_068889599
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All DBs
Position
19:5927335..5948605
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AA seq
555 aa
AA seq
DB search
MSSLRISEVLAFFLRKMNLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYH
KARQKQIQEDWELAERLQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKF
FTASSRAGAKKAAQEKTPKQGQLGRERNADNILRDLKEIFTPSWEVASPSEALAGKLKAE
IQEAKAPSPSIHRQASIETDRVSKEFIEFIRTYQKPGQDIYKQCKLFLDTMSHKRDLSIE
EQSECAQDFYQNVADRLQTRWKVPPEKVEKAMDEVEKYIMTRQYKYVFCPETTDDEKKDL
AVQKRIRALHWVTPQMLCVPVSEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSK
HIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYF
TNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSFSPDVCLGVKQMCKSLDL
LSQLNERQERIVSEAKKLEKDLIDWTDGITKEVEDIVEKYPLEIKPKSQALAAIDSENVE
NDKLPPPLQPQVYAG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagttccttgcggatcagtgaggttttggcttttttcctgaggaaaatgaacctgaaa
tcggagcgcagaggaatccacgtggatcagtcggagctgctgtgcaagaagggctgtggt
tactatggcaatcctgcttggcaggggttttgctccaagtgctggagggaggaataccac
aaggccaggcagaagcagattcaagaggactgggagctggcagagcggctccagcgtgag
gaggaagaagcctatgccagcagccagagcacccaaggggcacagtccctgaccttttca
aagtttgaggagaagaaaaccaatgagaaaacaagaaaggtcacaactgtgaagaagttc
ttcactgcttcctccagagcaggagctaagaaggcagctcaagagaaaacccctaagcaa
ggacagcttgggagggagagaaatgctgataacattctcagggatttgaaggagattttt
actccctcctgggaagtggcttccccttctgaagcgttggctggcaagctgaaagcagag
atccaggaggccaaggctcccagcccttccatccacaggcaggccagcattgagacagac
agagtgtccaaggagttcatagaattcatcaggacataccagaagcctggccaggatatc
tacaagcaatgcaaactctttttggacaccatgagccataaaagggatttaagcattgag
gaacagtctgaatgtgcccaggacttctaccaaaatgtagcagacaggttgcagacacgt
tggaaagtgccccctgaaaaagtggagaaggcaatggatgaggttgagaaatacatcatg
actcgacagtataaatatgttttttgccctgagacaactgatgatgagaagaaagacctt
gctgtccaaaaaaggatcagggctttgcactgggtaactccccagatgctgtgtgttcct
gtcagtgaggaaatcccagaagtctctgacatggttgtaaaggcaattacagatatcatc
gagatggactccaagcgtgtccctcgggataaactggcctgcatcaccaagtgcagcaag
cacatctttaatgccatcaaaatcaccaaaaatgagccagcttctgctgatgatttcctg
cccacactgatttacatcgttctgaaggggaaccccccacgcctgcagtccaacatccag
tacatcactcgcttctgcaaccccagcaggctgatgactggagaggatggatattatttc
actaacctgtgctgtgctgtggccttcattgaaaaactggatgctcagtctttaaacctg
agccaggaagattttgatcgtttcatgacgggccagacctccccaaaaaagcaggaatct
gacagtttttcccctgatgtgtgcctgggggtgaagcaaatgtgcaaaagcttagacctc
ctctctcagttgaatgagagacaggaaagaattgtcagtgaagccaagaagctggagaaa
gacctcatagattggactgatgggatcaccaaggaagtggaagatattgtggagaaatat
cccttagaaataaaaccaaaaagtcaagccttagcagccattgactctgaaaatgtggag
aatgacaagctgcccccaccactgcagcctcaggtttatgcaggataa
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