Aphelocoma coerulescens (scrub jay): 138120706
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Entry
138120706 CDS
T10543
Symbol
HIC1
Name
(RefSeq) hypermethylated in cancer 1 protein
KO
K24384
hypermethylated in cancer protein
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138120706 (HIC1)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
138120706 (HIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
BTB
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-met
zf-C2H2_3rep
zf-C2H2_11
Zf-C2H2_ZNF451_2nd
zf-C2H2_15
zf-Di19
zf-UBP
zf-C2H2_16
Zf-C2H2_ZNF451
Zn_ribbon_8
TRASH_HVO_1752_C
Motif
Other DBs
NCBI-GeneID:
138120706
NCBI-ProteinID:
XP_068889700
LinkDB
All DBs
Position
19:6449733..6461875
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AA seq
665 aa
AA seq
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MRVHRDLSWLAEATGRPGRRARSGMLDAMEVPSHSRQLLLQLNTQRTKGFLCDVIIVVQN
ALFRAHKNILAASSAYLKSLVVHDNLLNLDHEMVSPGIFRLILDFIYTGRLAECEPGSEQ
SLGAVLAAASYLQIPGLVALCKKKLKRSGKYCHLRGGYAPYKLGRGLRAATPVIQACYSG
TPRPVDLPPVEPATPLNTQCGELYASAAQGAPLHPHGLCPPERHCSPPCGLDLSKKSPTG
PSAQLLPTDRLLPSEPREPSLPPRHDSPPVSAGLLASHAAAYKDSPPGGEPGGHPHAPDP
FRSTPPCTEPPLPRADGRELMYRWMKHEPLGPYLDEGEAEKELDREEKAESPPAAPQPRY
PSVESNDLEPDNSTSEETGSSEGPSPGDALDRYCNHLGYEPESLGDNLYVCIPCGKGFPS
SEQLNAHVEAHNEEELYHKAAAEQAVPFLDKGGPGLGDILRPYRCSSCDKSYKDPATLRQ
HEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRI
HSGEKPYECQVCGGKFAQQRNLISHMKMHAAGPDGKAKLDFPDSVYAMARLTADQLGLKQ
EKAAELLSHTSHFLSDPKAMESLYPLAKFTAEHLGLSQDKAAEVLVQAPHLHAEAARTIE
RYSPP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcaccgagacctcagctggttggcggaggccaccggacgcccagggcggcgg
gcgaggagcgggatgctggacgccatggaggtgccgagccactcgcggcagctgctgctg
cagctgaacacgcagcgcaccaagggcttcctgtgcgacgtgatcatcgtggtgcagaac
gcgcttttccgtgcgcacaagaacatcctggccgccagcagcgcctacctcaagtcgctg
gtggtccacgacaacctgctcaacctggaccatgagatggtgagccctggcatcttccgc
ctcatccttgacttcatctacaccggccgcctggccgagtgcgagccgggcagcgagcag
agcctgggcgccgtgctggccgccgccagctacctccagatccccggcttggtggccctt
tgcaagaagaagttgaagcgcagcggcaagtactgccacctgcgcgggggctacgcgccc
tacaagctgggccgtgggctgcgggccgccacgccggtcatccaggcttgctactcgggg
acaccacggcccgtggacctgccacccgtggagccggcgacgccgctcaacacgcagtgc
ggggagctgtacgcctcggccgcccagggtgccccgctgcacccccacgggctgtgcccg
cccgagcgccactgctcaccgccctgcggcctcgacctctccaagaagagccccaccggc
ccctctgcccagctcctgcccaccgaccgcctgctgcccagcgagccccgcgagccctcg
ctgcccccacggcatgacagcccccccgtcagcgccggcctcctggccagccacgccgct
gcctacaaggactccccgccgggcggtgagccgggagggcacccccacgcccccgacccc
ttccgcagcacgccgccctgcaccgagcccccgctgccccgtgctgatgggcgtgagctg
atgtaccgctggatgaagcatgagcccctgggcccctacctggacgagggcgaggcggag
aaggagctggatagggaggagaaggccgaatcgccgcctgcggcgccgcagccccgctac
cccagcgtggagagcaatgacctggagcctgataacagcacgagcgaggagacgggcagc
agcgagggcccctcgcccggcgacgcgctggaccgctactgcaaccacctgggctacgag
ccggagagcctgggtgacaacctgtacgtctgcatcccctgtggcaagggcttccccagc
tccgagcagctcaacgcccacgtggaggcccacaacgaagaggagctctatcacaaggcg
gcggccgagcaggccgtgcccttcctggacaaaggtggcccagggctgggtgacatcttg
cggccttaccgctgctcctcctgcgacaagtcctacaaggacccggccactctgcggcag
cacgagaagacgcactggctgacgcgcccctacccctgcaccatctgcggcaagaagttc
acccagcgcggcaccatgacccgccacatgcgcagccacctcggcctgaagccctttgcc
tgcgacgcctgcgggatgcgcttcacccgccagtaccgcctgaccgagcacatgcgcatc
cactcgggcgagaagccctacgagtgccaggtgtgcggcgggaagttcgcccagcagcgc
aacctcatcagccacatgaagatgcacgcggccggccccgacggcaaagccaagctggac
ttccccgacagcgtctatgccatggcccgtctcaccgccgaccagctggggctcaagcag
gagaaggcggccgagctgctctcccacacctcgcacttcctcagcgaccccaaggccatg
gagagcctttaccccctggccaagttcacggcggagcacctggggctgagtcaggacaag
gcggccgaggtgctggtgcaggctccgcacctccacgccgaggctgcccggaccatagag
cgatactcgcccccctag
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