Aphelocoma coerulescens (scrub jay): 138120878
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Entry
138120878 CDS
T10543
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoe03032
]
138120878 (TOP1)
Enzymes [BR:
acoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
138120878 (TOP1)
DNA replication proteins [BR:
acoe03032
]
Eukaryotic type
DNA Topoisomerases
138120878 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
138120878
NCBI-ProteinID:
XP_068890048
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All DBs
Position
20:6282827..6349492
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AA seq
766 aa
AA seq
DB search
MSGDQLHNDSQIEADFRANDSHKHKDKHKDREHRHKEHKKDKEKDREKSKHSNSEHKDSS
EKKHKDKEKTKHKDGSSEKHKDKHKDKDKEKRKEEKMKSSSGDIKIKKEKENGFSSPPRI
KDEPDDDGFYASPKEDSKPLKRPREDDDADYKPKKIKTEDIKKAKKRKQEEEEDSKAKKV
KSKDKKVPEADKRKKPKKEEEQKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVK
FYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTSEEKSTITSLSK
CDFTHMSQYFKAQSEARKQMSKEEKQKIKEENERLLKEYGYCVMDNHKERIANFKIEPPG
LFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKIPAPPPGHKWKEVRHDNKVTWLVSWTEN
IQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVAL
YFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLHPELDGQEYVVEFDFLGKDSIRYYN
KVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQDLMEGLTAKVFRTYNASITLQ
QQLKELTNPDDNIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLA
DARRELKSAKADAKVRRDEKSKKTVESKKKAVQRIEEQLMKLEVQATDREENKQIALGTS
KLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMAEEDYEF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggaccagctgcacaacgattcccagatcgaggcggatttccgagcgaacgat
tctcacaaacacaaagataaacacaaagaccgagaacaccggcacaaagagcacaagaag
gacaaggaaaaagaccgggaaaagtccaagcacagtaatagtgagcacaaagattcctcg
gaaaagaaacacaaagacaaggagaaaaccaaacacaaagatggcagctcagagaaacac
aaagacaaacacaaagataaagacaaggagaagagaaaggaagagaagatgaagtcatct
tctggtgatataaaaataaagaaggaaaaggaaaatggtttctccagtccaccacgtatt
aaagatgaaccagatgatgatgggttttatgcatctcctaaagaggactccaaacccttg
aagagacctcgagaagatgatgatgctgactacaaacccaagaaaatcaaaacagaagac
atcaagaaagcaaagaaaaggaaacaagaggaggaagaggacagcaaagcaaagaaagtc
aagagcaaagataagaaagtccctgaagcggacaaaagaaagaagccgaaaaaagaagag
gagcaaaaatggaaatggtgggaagaagagcgctaccctgaaggcattaaatggaagttc
ctagagcacaaaggtcctgtatttgctccaccatatgaacctctgcctgaaaatgtcaag
ttttattatgatggtaaagtcatgaagctgagtaccaaagcagaagaagttgctacattc
tttgcaaaaatgcttgatcatgagtacactacaaaggagatcttcaggaaaaacttcttc
aaggactggagaaaggaaatgacctctgaagagaagagcactatcaccagcctcagcaag
tgtgacttcacccacatgagccagtatttcaaagctcagtcagaagctaggaaacagatg
tccaaggaggagaaacagaaaatcaaagaggagaacgagcggctattaaaggagtatggt
tactgtgtgatggacaaccacaaggagaggattgccaactttaagattgaacccccaggt
ctcttccgaggtcgtggcaaccatcccaaaatgggaatgttgaagagacgcatcatgcct
gaagacatcatcattaactgcagcaaggattccaaaatccctgcccctcccccaggacac
aaatggaaggaggtccggcatgataacaaggtgacctggctggtgtcatggactgagaac
atccaaggctctatcaaatacatcatgttgaaccctagctcaagaattaagggtgagaag
gactggcagaagtacgagacggctcggaggttgaagaagtgtgtagataaaatccggaat
caataccgagaagactggaaatccaaagagatgaaagtacggcagagggctgtcgcactg
tacttcattgataagcttgccctgagagctggtaatgaaaaagaagaaggagagacagct
gacaccgtgggctgctgctctctgagagtagagcacatcaagctgcatcctgaactggat
gggcaggaatacgtggttgagttcgacttcctcgggaaggactccatccgatactacaac
aaagtccctgtggagaagagggtgtttaagaatcttcagctgttcatggagaacaagcag
ccagaggatgacctctttgaccgcctcaataccagtatcttaaataaacaccttcaagac
cttatggagggactgacagccaaggtattccgtacttacaatgcctccatcacgctacag
cagcagctcaaggagctcactaatccggatgacaacatcccagcaaagatcctctcctac
aaccgtgccaacagagcggtggccattctgtgtaaccaccagagagctccacccaaaacc
tttgagaagtccatgatgaacctgcagagcaagattgatgccaagaaggagcaattagct
gatgccaggagggaactgaaaagcgccaaagctgatgccaaggtccggagggatgagaag
tctaaaaagacagtggagagcaagaagaaagcggtgcagaggatcgaggagcaactgatg
aagctggaggttcaggctacagatagggaggagaacaagcagatcgctttgggcacctcc
aaactcaactatctggatcccaggatctctgttgcttggtgtaagaagtggggaattcct
atagagaagatttataacaaaacccaacgagagaaatttgcctgggctatcgacatggca
gaggaagactatgagttttaa
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