Aphelocoma coerulescens (scrub jay): 138120892
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Entry
138120892 CDS
T10543
Symbol
CHRNA4
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04080
Neuroactive ligand-receptor interaction
acoe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
138120892 (CHRNA4)
04082 Neuroactive ligand signaling
138120892 (CHRNA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
acoe04040
]
138120892 (CHRNA4)
Ion channels [BR:
acoe04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
138120892 (CHRNA4)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
138120892
NCBI-ProteinID:
XP_068890075
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Position
20:9878588..9898722
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AA seq
624 aa
AA seq
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MGFLVPKGNLLLLLCASIFPAFGHVETRAHAEERLLKKLFSGYNKWSRPVANISDVVLVR
FGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPQEYENVTSIRIPSELIWRPDIVL
YNNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYD
KAKIDLVSMHSHVDQLDYWESGEWVIINAVGNYNSKKYECCTEIYPDITYSFIIRRLPLF
YTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPL
IGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVRRVFLDVVPRILFMKRPSTVK
DNCKKLIESMHKITNAPRLWSEIDVEPNFTTSSSPSPQSNEPSPTSSFCAHLEEPAKPQP
ICRSPSGQYSVLHPEPVQVTCSSPQPSCHPPRDTQATSALKGRSLSVQQMYSPNKAEEGT
IRCRSRSIQYCYLQEDSSQTNGHSSGSPASQRCHLNGEQPQHKPPQCKCKCKKGEAAGTA
AQGSKSHSTKEQHLVLMSPALKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFL
WMFIIVCLLGTVGLFLPPWLAGMI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctcgtgcctaagggaaacctcctcctcctgctgtgtgccagcattttcccc
gcctttggccatgtggagacccgagcccacgcagaggagcgactcctgaagaaactcttc
tctggttataacaagtggtcccgtcccgttgccaacatctcggacgtggtcctcgtccgc
ttcggcctgtccatcgcccagctcatcgatgtggatgagaaaaatcaaatgatgaccacg
aatgtgtgggtgaagcaggagtggcacgactacaagctgcgctgggacccccaggaatac
gaaaatgtcacatccatccgaatcccctcagagctcatctggaggccagacattgtcctt
tacaacaatgctgacggtgactttgcagtcacccacctgaccaaggctcacctcttctac
gacgggagaattaagtggatgccccctgctatctataaaagctcctgcagcatcgacgtc
accttcttcccctttgaccagcaaaactgcacgatgaagtttggctcctggacctacgac
aaagccaagatagacttggtgagcatgcacagccacgtggaccagctggactactgggag
agtggggagtgggtcatcatcaatgctgtgggcaattacaacagcaagaaatatgagtgc
tgcacagagatctaccccgatataacttattccttcattatccggaggctgccgctgttc
tacaccatcaacctgatcatcccctgcctgctgatctcctgcctgaccgtcctggtcttc
tacctgccctctgagtgtggagagaagataaccctgtgcatctccgtgctgctgtccctc
actgtgttcctgctgctcatcacggagatcatcccatccacctccttggtcatccctctg
attggggagtacctcctcttcaccatgatatttgttaccttgtctatcatcatcactgtc
tttgtgctcaacgtgcaccaccgctccccccgtacccacacgatgccagactgggtgagg
agggtcttccttgatgtagtcccacggatccttttcatgaaacgtccctccacagtgaag
gacaattgcaagaagctcattgagtccatgcacaaaataaccaacgcgccaaggctttgg
tccgagatcgacgtggaacccaacttcactacctcatcctcccccagcccccagagcaat
gagccatcacccacctcttccttctgtgcccaccttgaggagccagccaagcctcagccc
atctgcaggtccccctctgggcagtactctgtgctgcacccagagcccgtacaggtgacc
tgctcctctccacagccctcctgccaccccccgagagacacccaggccacctctgccttg
aaaggcaggtcactgagtgtccagcagatgtacagccccaacaaggcagaggaggggaca
atccgctgcaggtcccggagcatccagtactgctacctgcaggaggactcttcccagacc
aatggccactccagtggctctccagcatcccagcggtgccacctcaacggggagcagccc
cagcacaagccccctcagtgcaagtgtaagtgcaaaaagggtgaggcagccggcacagca
gcccaggggagcaagagccacagcaccaaagagcaacaccttgtgctgatgtccccagcc
ctgaagctggcagtggaaggggttcactacatcgccgaccacctgcgcgcggaggatgcg
gatttctcagtgaaggaggactggaagtacgttgcaatggtcatcgacaggattttcctc
tggatgttcatcattgtgtgtttgctgggaactgttgggctctttctcccaccgtggctg
gcaggaatgatctaa
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