Aphelocoma coerulescens (scrub jay): 138120912
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Entry
138120912 CDS
T10543
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138120912 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acoe03036
]
138120912 (SS18L1)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
138120912 (SS18L1)
GBAF(ncBAF) complex
138120912 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
138120912
NCBI-ProteinID:
XP_068890118
LinkDB
All DBs
Position
20:complement(11180264..11194125)
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AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMSQSASNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQNTMPTTSLSMTVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccaagaggcaaaggggaggtcacccagcaaact
atccagaagatgctagatgaaaatcaccacctaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaatctggtttac
ttggcaacaatagcagactctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaatataaacttgggcccgggagggatgagtcagagtgcatccaaccaatccctccac
tcccagagcaatctcagcgatgccatcgggaccggccttcctccttcctccctcatgcag
agtcagattagcaatggtcctaaccacgtgtctatgcagcagtcaggccagaacaccatg
cccacgacctctctgagtatgactgtcagcagccacgggactggccctggttacagccac
acggtgccggcgtctcagaatgtgccaatgcaaggccaggggtcaataggcaattacgtc
tctcgaacaaacatcaacatgcagtctaacccagtctccatgatgcaccagcaagcagca
acgtcacattacaactcggcacaaggagggagccagcactaccagggacaatcctccatt
gccatgatgagccagagcaaccaaggcaacagcatgatggggcagcgacccatgggccct
tacagagcttcacagcaaggttcctcgcagcagtacatgggtcaggaagaatattacagt
gagcagtacagccatggccaaggctcatcagaacctatgaatcagcaatactatccagat
ggacatggtgattatgcctatcagcagtcatcctacactgaacagagctatgaccggtcg
tttgacgactctacacaacactactatgaaggaggaaattctcagtacagccagcagcag
gcaggataccaacagggagctgcacaacagcaaacatattcccagcagcaatacccaaat
caacagagttacccaggacaacagcaaggatatggtcctgcacaaggagcctcttcacag
tattccagctaccaacagggacaggggcagcaatatggaagttacagagcttcccagaca
ggcccatccgctcagcaacagaggccttatggctatgagcagggacaatatggaaattac
cagcaataa
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