Aphelocoma coerulescens (scrub jay): 138120932
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Entry
138120932 CDS
T10543
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138120932 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acoe04515
]
138120932 (CDH4)
Cell adhesion molecules [BR:
acoe04515
]
Cadherins
Major cadherins
138120932 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
138120932
NCBI-ProteinID:
XP_068890154
LinkDB
All DBs
Position
20:complement(11301243..11721845)
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AA seq
917 aa
AA seq
DB search
MRPGPSRRLLLLLFLPVWGSAAAHNGDLTVRPTCKPGFSEQDYTAFISQNINEGQKLLKV
KFNNCAGNKGVRYETNSLDFKVRADGTLYAAHHLQVPSKQLILMVTAWDPQTLGRWEAMV
RFLVAEKSQHNGHKPKGRKALPGELAQQQSDTLLPWRQHQSANGLRRQKRDWVIPPINVP
ENSRGPFPQQLVRIRSDKDKEIHIRYSITGVGADQPPMEVFNIDPVSGRMYVTRPMDREE
RASYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTV
TANDADDGTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIV
QATDMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDRD
QPHSPNWNAIYRIISGDPSGHFTIRTDPITNEGMVTVVKAVDYEMNRAFMLTVMVSNQAP
LASGIQMSFQSTAGVTISVTDVNEAPYFPTNHKLIRLEEGVPTGTVLTTFSAVDPDRFMQ
QAVRYSKLSDPANWLNINATNGQITTAAVLDRESDYIKNNVYEATFLAADNGIPPASGTG
TLQIYLIDINDNAPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVR
KNWTITRLNGDYAQLSLRIMYLEAGVYDVPIIVTDSGNPPLYNTSVIKVKVCPCDENGDC
TTIGAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDN
ILKYDEEGGGEEDQDYDLSQLQQPETMDHVLNKTPGVRRVDERPIGAEPQYPIRPVIPHP
GDIGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDW
GPRFKKLADMYGGGEED
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccggcccgagccggcggctgctgctgctgctcttccttcccgtctggggctcg
gcggcggcacacaatggggatcttacagttagacccacatgcaagcctggcttctcagaa
caagactacacagcattcatctcccagaacatcaatgaagggcagaagttactcaaagta
aaatttaataactgtgctggtaacaagggtgtgcggtatgaaaccaacagcctggacttc
aaggtgagggcggacgggaccctgtatgctgcccaccacctgcaggtgccctccaagcag
ctgatcctgatggtgaccgcctgggacccccagaccctgggcagatgggaggccatggtc
aggtttctggtggcagagaagtcccaacacaatggacacaagcccaaaggaaggaaggca
ctgcctggagagctggctcagcagcagagtgacaccctgctgccgtggcggcagcaccag
agtgccaacgggctgcggcggcagaagcgggactgggtcatcccacccatcaacgtgcca
gaaaactccagagggcccttcccgcagcagctggttcggatccgttccgataaggacaaa
gagatccatatcagatacagcatcaccggagtgggagccgaccagccgcccatggaggtc
ttcaacattgaccctgtgtctggcaggatgtacgtgacacgcccgatggacagggaagaa
agagcttcctaccatctccgggctcatgcggtggatatgaatggaaacaaggtggagaat
cctattgacctttacatctatgtgattgatatgaatgacaacaggccagagttcatcaac
caagtctataatggatctgttgatgaaggctccaaaccagggacctacgtgatgacggtg
acggcgaacgacgcagacgacggcaccacggccaacgggatggtgaggtaccgcatcgtc
acccagaccccacagagcccctcacaaaacatgttcactattaacagcgagacaggcgac
attgtcaccgtggctgctggactcgacagggagaaagttcagcagtacatagtcattgtt
caagcaacagatatggaaggaaatcttaactatggtctctcaaacacggccacagcgatc
attacagtgacagatgtgaatgacaacccccctgaattcacgaccagcacttattcagga
gaagtgcctgagaacagagtggaggttgtggtggcaaacctgacagtgatggaccgggac
cagccccactctcccaactggaatgccatctaccgcatcatcagcggggacccctctggc
cacttcaccatccggacagaccccatcaccaacgagggcatggtcaccgtggtgaaggca
gtcgattacgagatgaacagagctttcatgctgacagtgatggtatcaaaccaagctccc
ctggccagtggcatccagatgtccttccagtcgacagcaggagtcaccatttcagtcaca
gatgtcaatgaagcaccgtatttcccaacgaaccacaagttaatcaggctggaggaaggg
gtgccaacggggaccgtcctgacaacgttttcggctgtggatcccgatcgcttcatgcag
caggcagtaagatactctaagctgtcagatcctgcaaactggctgaacattaatgccaca
aatggtcagatcactactgctgctgtccttgatcgagagtcagactacattaagaataat
gtctacgaggccacattcttggcggctgacaacggaattccccccgccagcggcaccggc
acgctgcagatctacctaatcgacatcaacgacaacgctccggagctgctgccaaaggag
gcgcagatctgcgagaagccaaacctgaatgtcatcaacatcacagccgcggacgctgac
atcgatccaaacgtggggcccttcgtcttcgagctgccaagtgtgccatctgcggtgagg
aagaactggaccatcacacggctcaatggggactatgcccagctcagtttgcggatcatg
tacctggaagcaggagtgtacgatgtgcccatcatcgtgacggactcaggaaaccccccc
ttgtacaacacctctgtcatcaaggtgaaggtgtgcccgtgtgacgagaacggcgactgc
accaccatcggggccgtggctgctgcagggctgggcacgggggccatcattgccatcctg
atctgcatcattatcttactgaccatggttctgctctttgtggtgtggatgaagcgccgg
gagaaggagcgccacaccaagcagctcctcatcgaccccgaggacgacgtcagagacaac
atcctcaagtacgacgaagaaggaggtggagaggaggatcaggattacgatttaagccag
ctccagcagccagagaccatggatcacgtgctgaacaagacacccggagtcagaagggtg
gatgaaagacctattggtgctgaaccgcagtatcctataagaccagtaatcccacatccg
ggggatattggtgattttattaatgagggcctgcgtgcggccgacaatgaccccacagcc
cccccctacgattccctgctcgtctttgactacgagggcagcggctccaccgccggctcc
gtcagctccctcaactcctccagctccggggaccaggactacgactacctgaacgactgg
ggacccaggttcaagaagctggcggacatgtacgggggaggagaggaagattaa
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