Aphelocoma coerulescens (scrub jay): 138120952
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Entry
138120952 CDS
T10543
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04110
Cell cycle
acoe04218
Cellular senescence
acoe04350
TGF-beta signaling pathway
Brite
Transcription factors [BR:
acoe03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
138120952 (RBL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138120952
NCBI-ProteinID:
XP_068890173
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Position
20:1396174..1421438
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AA seq
1052 aa
AA seq
DB search
MSRPGAADPGAAVERLCRELNLDAASAAEALRDFTALRGTYSLEGEALHWLACALYVACR
RSRVPTVGSSPMEGNGVSLTRILRSARLSLIQFFSKMKKWMDMSNLPQEFRERVERLERN
FEVSTVIFKKFEPIFFDIFQNPYEETSKPHRSRKQRRVPCSVKDLFNFCWTLFVYTKGNF
RMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPSFKGLPVEFHTLEIKASEDPPCI
IAMLCELHDGLLVEAKGIKEHYFKPYIAKLFDRKILKGDCLLNLCNFIENSKALNKEYEE
YVLTVGDFDERVFLGADAEEEIGTRKFPADVPGEKTAARAHVECHLQQHFEKKRSFAPST
PLTGRRYLREKEAVITPVASATQSVSRLQSMVAGLKNAPSEQLTAIFESCARSPMESIMS
RVKEIGETFCCRYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGKDLT
ALLEQDLFHRSLLACCLEIVLFAYSSPRTFPWIIEVLDLRPFYFYKVIEVLIRSEEGLSR
DMVKHLNSIEEQILESLAWTRNSALWNALEASENKVPTCEEVIFPCNFEASNGGSGLGHL
PMMPLSPIIHPRVKEVRTDLGGSLRRDMQPLSPISVHERYSSPTAGSAKRRLFGDDSPKE
MQMEKIVTKGTKLTIAPASSIGTENTSASPGQTVLTITTATGPGKAGQKVTIPLHGIAND
MGGITLIPISINLGQPCKVDAQAPCHPPGNQAQEVQLPAASKPKRTGSLALFYRKVYHLA
SVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTKEER
TFQDIMKSYRNQPQAHSHVYRSVLLRNTSGDVPLDKNGNPDMEMTDSPVKAGSSSGRSAA
ENSSESETEERGDLIKFYNAVYVGRVKSFALKYDTTNQDHVMEAPPLSPFPSIRQQPVSP
RRISQQHSVYVSPHKNGACLTPRTALLYKFNGSPSKSLKDINNMIKQGEHRSKKRAITID
SDTESPTKRLCQDNDDVLLKRLQDVVSERANH
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccgggggccgccgatcccggcgccgccgtggagcggctctgccgggagctc
aacctggacgcggcgagcgcggccgaggcgctgcgggacttcacggcgctgcggggtacc
tacagcctggagggcgaagcgctgcactggttggcctgcgcgctgtacgtcgcctgccgc
cggagccgcgtgcccaccgtggggagcagcccgatggaggggaacggcgtctccctgacc
cgcatcctgcgctccgcacgcctcagtttaattcagttttttagcaaaatgaagaagtgg
atggacatgtcaaacctaccccaggaattccgagagcgagttgagaggctggagagaaat
tttgaagtgtcaactgtgattttcaaaaagtttgaaccaatattttttgatatatttcaa
aacccttatgaagaaacttccaaaccacatcgaagcaggaagcagaggcgggtgccatgc
agcgtcaaagatctcttcaacttctgctggactctctttgtgtacactaagggtaatttc
cgtatgattggagatgatttagtaaattcctatcatttacttctgtgctgcttggacctg
atttttgccaatgcccttctgtgtccaaacagaagagatttgctaaatccgtcatttaaa
ggcttaccagtggaattccacactctggagatcaaagcctccgaggaccctccctgcatc
attgccatgctctgcgagctgcacgacgggctcctcgtggaagccaaaggcataaaggag
cactacttcaagccatacattgcaaagctgtttgataggaagatcttaaaaggagattgt
ctgttgaatctttgcaattttatagaaaatagcaaagcactgaataaagagtatgaagag
tatgttctgacagtgggtgactttgatgagagagttttcctgggagctgatgctgaagaa
gaaattggcactcgaaaattccctgcagatgtaccaggagagaaaacggcagcaagagct
cacgtggaatgtcatctgcagcagcattttgaaaagaaaaggtcatttgcaccttcaact
ccactgactggcagaagatacctgcgagaaaaggaagcagtcatcactcccgtggcttca
gccacacagagcgtgagccgtttgcagagcatggtggctgggttgaaaaatgcaccaagt
gaacaacttacagctatttttgagtcttgtgcccgcagccccatggaaagcatcatgagc
agagtgaaggaaattggtgagaccttttgttgcaggtacactcagtcaacagatgaacag
ccaggatctcatatagattttgctgtaaacagattaaaactggcagagatcttgtactat
aaaatcttggagaccataatggtgcaagaaacacggagactgcatgggaaggatctgact
gctctcctggaacaggatctctttcaccgctccctcctggcatgctgcttggagattgtg
ctcttcgcttacagctcccctcgcacctttccctggatcattgaagttcttgacctcagg
ccattctatttctataaggttattgaagtgctgattcggtctgaggaaggactttccaga
gacatggtgaagcacctcaatagcattgaggaacagattctggagagtctggcctggact
cggaactcggcactctggaatgcacttgaggcctcagaaaacaaagtcccaacctgtgaa
gaagtaatatttccctgtaattttgaagccagcaatggaggaagtgggcttgggcacttg
cctatgatgccattatctcccataattcatcctcgagtgaaagaggttcgaacagatctt
ggtgggagtttaagacgagatatgcagccattgtctccaatctccgttcacgagcgctac
agttctcctacagctggaagtgctaagagaaggctctttggagatgacagccccaaagaa
atgcagatggaaaaaatcgtaacgaaaggaactaagctgacaattgctccagcatcaagc
attggtactgaaaacacatcagcgtctcctggccagacagtgttgaccataacaactgct
acaggaccaggaaaagcaggacagaaggtcactatcccactgcatggtattgcaaatgac
atgggtgggatcaccttgatccccatttccattaatttaggccagccatgtaaagtggat
gcccaggctccctgccaccctcctgggaaccaagcacaagaagtacagctgccagcagcc
agcaaaccgaagagaacaggctccttggcactgttctacaggaaggtgtatcatctggca
agtgtgcgcttgcgcgatctgtgcttaaagctggatgtttccaatgacttgcgcaggaag
atatggacgtgctttgagttcacgttggttcattgtgctgatcttatgaaagacagacat
ttggaccagctcctcctctgtgctttttatatcatggcgaaggtaaccaaagaggaaaga
acttttcaggacataatgaaaagttacagaaatcagccacaagcacacagccatgtttat
aggagtgtcttgttgagaaatacttctggtgatgtcccattggacaaaaatggaaaccca
gatatggagatgacagactcacctgtgaaagctggcagctcctcgggacgatccgcagca
gagaactcgagtgagtcagaaacagaggagagaggagatcttattaaattctataatgca
gtctacgtaggaagagtaaagtcatttgcactgaagtatgataccacaaaccaggatcat
gtgatggaagcgccgccgctgtcgccgttccccagcatccggcagcagccggtgtctccc
cggcgcatctcccagcagcactctgtgtacgtgtcgcctcacaagaacggcgcctgcctc
acacctcgaactgctctgctctacaaattcaatggcagcccttccaagagtttgaaggac
atcaacaatatgataaaacaaggtgaacacaggagtaagaagcgagcaataacaattgac
agtgacactgaatcccccacgaagcgactctgccaggacaacgatgatgttctactaaaa
cgtctgcaggatgttgtcagtgaaagagcaaatcactaa
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