Aphelocoma coerulescens (scrub jay): 138120953
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Entry
138120953 CDS
T10543
Symbol
SAMHD1
Name
(RefSeq) LOW QUALITY PROTEIN: deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03250
Viral life cycle - HIV-1
acoe04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138120953 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
138120953 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138120953 (SAMHD1)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
138120953 (SAMHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PDEase_I
ODP
Motif
Other DBs
NCBI-GeneID:
138120953
NCBI-ProteinID:
XP_068890178
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Position
20:1426865..1456640
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AA seq
714 aa
AA seq
DB search
MMTGQCRCRVPGISRESPRAGPPPAQPGRRGEXSHRRAPDATLPPCGVRRALGASWGFSP
GPGLLPGPLCGPAAVPRGGXGAARGGDVTARRTPRPVAPARWPCGMGSPAGVPAKRARCE
GPRGPAAPGSDRSDPRLWDTERLCQHLSRCGVGDPSLLRRFRESGITGRMLLDLPACAPE
VTRVCCPAERLEVLACLTQLRQQHMEVMKVFNDPIHGHIEMHPLLVQIIDTPQFQRLRYI
KQLGGTYFVFPGASHNRFEHSLGVGYLAGYLVRTLKERQPELDITQRDILCVEIAGLCHD
LGHGPFSHMFDGRFIPLTRPYLKWKHETASVQMFEHLITSNKLEEVMKSYGLVLEEDMLF
IKEQIGGPIDETSCVTSWPYRGRPKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIPN
NFDYKRLLIFTRVCEVENQKHICTRDKEVGNLYEMFHTRYCLHRRAYQHKTGNIIEIMIT
EAFQKADKFFEVRGSGGKVYHISTAMEDMEAYAKLTDCIYQEILHSSHPELEEAREILRK
VERRELYRFLGETRPESKKEILKSNSLAESIANSKPEKDPPDVELKAENFIVDIINMDYG
MKEQNPIDKVHFYCKADPSKAVNISKEQVSKFLPIIFMEQVVRVYYKSQDPDVISAAKQY
FIQWCMENDFTKPQDSDVVAPHLTPLKKTWNNMTDDEHTRASEPSCRQRLPFDE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgggcagtgccggtgcagggttccaggtatctcacgtgaatcccccagagca
gggccgccgccagcccaaccgggtcgccgcggcgaanncagccaccggcgggccccagac
gcgaccctgccgccctgcggggtgaggcgggctctgggggcgagctggggcttctccccg
gggccggggctcctccccgggcccctctgcgggccggccgcggtgccgaggggcggctga
ggggccgcgcggggcggtgacgtcactgcgcgccggaccccccggccggtggcgcctgcg
cggtggccgtgcggcatggggagcccggcgggcgttcccgccaagcgcgcgcggtgcgag
gggccccgcggccccgccgccccgggcagcgaccgcagcgacccgcggctgtgggacacg
gagcggctctgccagcacctctcccgctgcggcgtgggcgatcccagcctgctgcgccgc
ttccgagagagcgggatcaccgggaggatgctgctggacctgccggcctgcgcccccgag
gtcacccgtgtctgctgcccagctgagcgactggaagtgctggcgtgcctgacacagctg
cgacagcagcacatggaggtgatgaaggtttttaacgatcctattcatgggcacattgaa
atgcatcccctgcttgttcagatcattgacacccctcaattccagcgcctccggtacatc
aagcagctgggtggcacttactttgtttttccaggagcctctcacaaccgctttgagcac
tccctaggggttggctaccttgcaggatatctggttcgtacactgaaggagagacaacca
gaactggatataacccagcgagacatcctctgtgtagaaattgccgggctttgtcatgat
ttgggtcatgggccattttcacacatgtttgatggaagatttattccactcactcgtcca
tatttgaagtggaagcatgaaactgcttctgttcaaatgtttgagcatttgatcacttcc
aataaactagaagaagtcatgaagtcatatggtcttgtcctggaagaagatatgctcttc
atcaaggaacaaataggagggcctatagatgaaacttcctgtgtgacatcatggccctac
cgtggtcgaccaaaggagaaaagtttcctctatgagatagtagctaacaaaaaaaatggc
attgacgttgacaagtgggattattttgcaagggactgccatcacctgggaatcccaaat
aattttgactataagcgattgcttatcttcactcgggtctgtgaagtggaaaaccagaag
cacatctgtacccgtgacaaggaagttggaaatttgtacgagatgtttcacacccggtat
tgcctgcaccggagagcataccagcataagactggcaacatcattgaaataatgattaca
gaagcctttcaaaaagcagacaaattttttgaagtaagaggctctggagggaaagtgtat
catatttctacagcaatggaggacatggaagcctacgctaaactaactgactgtatctac
caggaaattctgcactcaagtcatccagaactggaggaggcacgagaaattttgcgtaaa
gtagaacgacgtgaattatacaggtttttaggagagactcgacctgaatcgaagaaggaa
attttaaagagtaatagcctggcagaaagcattgctaattccaagccagagaaggaccct
ccagatgtggagctaaaggctgagaatttcatagttgatattatcaacatggattatgga
atgaaagaacagaatccaattgataaggttcatttctattgcaaggctgatccttccaag
gcagtcaatatcagtaaagaacaggtttcaaagtttttacccataatatttatggagcag
gttgtccgggtttattacaaaagtcaggatccagatgttatttcagctgcaaaacagtac
tttattcagtggtgtatggagaatgatttcaccaaaccacaggatagtgatgttgttgcc
cctcatctaactccactgaagaaaacctggaataacatgacagatgatgaacacacgaga
gcctcagaacccagctgcagacaaaggcttccttttgatgagtaa
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