Aphelocoma coerulescens (scrub jay): 138121034
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Entry
138121034 CDS
T10543
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03022
Basal transcription factors
Brite
Transcription machinery [BR:
acoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
138121034 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
138121034 (TAF4)
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
138121034 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138121034
NCBI-ProteinID:
XP_068890306
LinkDB
All DBs
Position
20:11228623..11264942
Genome browser
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGTGAPTVTLVRPPIHTAGPTVAAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSSVPAAPATQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGSAQTTALGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRIQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacaagcaccagcaccaccactgcagca
gcaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacagtg
cagactttgaatgggagtaatgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgactgccaaccctgctcctgcacctgctgttgcccctctcgttaac
aatggacctggatctgtggggaaaggaaacgctgttaatgctgttttgccctcagcttct
aacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcctcctcctcg
cccacagtgatctcctcgcagccaccaccaagtgttggcaccggggcgcccacggtaacg
ctcgtgaggcccccaatccacacagcaggacccacggtggctgcagctggtgcagccact
cagaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacgtcacttgtgaacagccagtct
ggttcctctgtgccagcagctcctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccaacagcagacactggctactggtggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctctaatgttgctcccaat
cctggtgggatacctcctgcagctcctggaacccccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaacaccaaccacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccaactaac
attcagaattttcagttaccaccaggcatggtcctcgtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaagccttggcgcagatgcaggcacaggcacatgcccagtctcag
cctcagaacactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacgcccattattgcccgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaacaacagtgcaacccacgacaacgctacagcgtcct
ccggttgtgcaacctcagattgttctgggtggttctgcacaaacaaccgcgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacggccacctcc
actgctgccacagaaacgatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtcctcagagactgcggctaatgtgaaagaatta
gtacagaacctgctggatggaaaaattgaaccagaagactttaccagcaggctgtataga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccg
acgacgcaggcgacgatagccacgatcccgtcggcggcggccgtgctgctgagctcctcg
gtgcagcgcacggcgggcaaggccactgccactgtcaccagtaccctccagcaacccgtc
atcagcctcactcagcccacacaagttggtgtcagtaaacaagggcagtccacgccactg
gttatccagcagtctcaaaaagcaggggcattgataaggcctccacaagtaacgttgaca
cagacacccatggtggcattgcggcaaccacacagtcgtattatgctcactactcctcaa
atccaactgaatcagcttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagcttgtgggcaca
ttaacaaggtcctgtaaagatgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaagcacggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagaatacaaaacctagtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggccaaggagatgcagcagcaagagctagcacagatgagacagagg
gacgccaacctgactgcgttagctgccatcggtcccagaaagaaaaggaaagtagattca
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
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integrated database retrieval system
