KEGG   Aphelocoma coerulescens (scrub jay): 138121042
Entry
138121042         CDS       T10543                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1
  KO
K14298  mRNA export factor
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013  Nucleocytoplasmic transport
acoe05164  Influenza A
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    138121042 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    138121042 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoe03019]
    138121042 (RAE1)
   03036 Chromosome and associated proteins [BR:acoe03036]
    138121042 (RAE1)
Messenger RNA biogenesis [BR:acoe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     138121042 (RAE1)
Chromosome and associated proteins [BR:acoe03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    138121042 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_C Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_RSE1_2nd Beta-prop_EIPR1 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_SPT8 PepSY
Other DBs
NCBI-GeneID: 138121042
NCBI-ProteinID: XP_068890313
LinkDB
Position
20:complement(13193488..13201034)
AA seq 368 aa
MSLFGSTSGFGTGGTSMFGSTTADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctcttcggatcaacgtcggggtttggtaccggaggtaccagcatgttcggcagc
acgacagcagataaccacaacccgatgaaagatattgaagtaacatctccacctgatgac
agcatatcttgtttagcatttagtccgccaacactgccgggtaatttcctcattgcagga
tcatgggcaaatgatgttcgctgctgggaagttcaggataacggacagacaattccaaag
gctcagcagatgcacacagggcctgtactagatgcctgctggagtgatgatgggagtaaa
gtatttactgcttcctgtgataaaactgccaaaatgtgggatctcaacagtaatcaagca
attcagattgcacaacatgatgctcctgtgaagactatccattggattaaagcaccaaat
tacagctgtgtgatgacaggaagctgggataaaacattgaagttctgggatacccgttca
ccaacacctatgatgacactgcagctccctgaaagatgttactgtgcagatgtggttcat
cctatggcagctgtggccactgcagaaaggggtttgatagtttatcagttagagaaccag
ccttctgaatttagaagaatagagtctcctcttaaacaccagcatcgctgtgttgctatt
ttcaaagacaaagtgaacaaaccaactggatttgcccttggaagtattgaagggagagta
gctattcattatatcaaccccccaaatcctgcaaaagataatttcacttttaaatgccat
cgctccaatggaacaaacacatcagcacctcaggacatctatgctgtcaatgggatagca
ttccaccctgtccatggtactctggccacagtagggtctgatgggagattcagcttttgg
gataaagatgcacggacaaagctaaaaacctcagagcaactggaccagccaatatctgct
tgttgtttcaaccacaatggcaatatatttgcttatgcttccagctatgattggtcaaag
ggtcatgaattctataatccacaaaagaaaaactacatttttctgcgaaatgcggcagag
gagctgaagcccaggaataagaagtag

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