Aphelocoma coerulescens (scrub jay): 138121174
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Entry
138121174 CDS
T10543
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04060
Cytokine-cytokine receptor interaction
acoe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138121174 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
138121174 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
acoe04052
]
138121174 (GDF5)
Cytokines and neuropeptides [BR:
acoe04052
]
Cytokines
Transforming growth factors (RSTK binding)
138121174 (GDF5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
RBD_ZCCHC3_2nd
Motif
Other DBs
NCBI-GeneID:
138121174
NCBI-ProteinID:
XP_068890527
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Position
20:complement(2669467..2673065)
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AA seq
500 aa
AA seq
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MKILHFLTLLLWHLTWLSLDLVPGALSNSEAGQGNPGSKLGFLKAEGKERNPSARAGTLR
TASHGYSAGTSKARTKSSAVQAGALLAKNDESKKVPSRTAATEGKVGHLPSRPSGVRTVT
PKVQNLSSKVALKKTGTSSTDTDSFKTKKTKEPVTQREAKETFRHPPITPHEYMLSLYRT
LSDAERKGVNGSVKLEAGLANTITSFIDKGQDERTPTIRKQKYIFDISALEKDGLLGAEL
RILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQASTLLDSRTVSITDTPKWEVFDIWKLFR
NFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKAR
SGQDDKTVYEYLFNQRRKRRAPLATRQGKRPTKNLKARCSRKALHVNFKDMGWDDWIIAP
LEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDS
ANNVVYKQYEDMVVESCGCR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgcattttctcactttactgctttggcatttgacttggctgtctctggat
ctagttcctggagcgctgagtaattctgaagcaggccagggtaacccaggatctaaacta
ggttttttgaaagcagaaggaaaggagaggaatccctccgcacgggcaggtacactgagg
actgcaagccatggatacagtgctgggacctcaaaggccaggactaaaagcagtgctgtt
caggctggagctctgctggccaagaatgatgagtcaaagaaggttccctcaagaacagca
gccacggagggcaaggtaggacatctccccagcagaccttctggagtaaggacagtgact
ccaaaggttcaaaatcttagcagcaaggtggctttgaaaaaaactggcacaagcagtact
gacactgattctttcaaaaccaaaaagactaaagagcctgtaacccagagggaagctaag
gaaactttccgacatcccccgataacgccacatgaatacatgctctctttgtacaggact
ctctcagatgcagaaagaaagggtgttaatggaagtgtaaaactggaggctggacttgcc
aatacaataaccagctttatagacaaaggacaagatgagcgaacaccaactataagaaaa
caaaaatatatttttgacatcagtgcattagaaaaagatggtttgctgggagcagagctt
cgaatattgagaaaaaaaccttctgatacatggaagtctcattcttctggaaaaacttcc
caagtgaaattatttagttgctctacaaacagacaagcctcaacactcctggactctcga
actgtcagtatcactgatacacccaagtgggaagtgtttgacatctggaaacttttcaga
aactttaaaaacttggttaacttgtgttttgagctggaaacttttgacagggggagagct
gttgatctcaggagtgtgggatttaatagaacgggaagacaggtcaatgaaaaggctctg
ttcttggtgtttgggaggacgaaaaaaagagacttattcttcaatgaaatcaaagctaga
tccggccaagatgacaaaactgtttatgagtacttattcaaccagaggcggaagagaaga
gcccctctagcaacacggcaagggaagaggcccaccaagaatctgaaggcgaggtgtagc
agaaaagccctccacgtgaattttaaggatatgggctgggatgactggataatagcccct
ctggagtatgaagcgtatcactgcgaagggctctgtgaattccccctccgatcccacctg
gagcccaccaaccacgcagttatccagacattaatgaactcgatggacccggaatcaacc
cccccgacttgctgtgtcccaacccgtctgagccccatcagcatccttttcattgactct
gcaaacaacgtggtctacaagcagtacgaagacatggtggtggagtcgtgtggttgtagg
tag
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