Aphelocoma coerulescens (scrub jay): 138121182
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Entry
138121182 CDS
T10543
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acoe03000
]
138121182 (SOX12)
Transcription factors [BR:
acoe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138121182 (SOX12)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138121182
NCBI-ProteinID:
XP_068890539
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All DBs
Position
20:8560310..8564455
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AA seq
299 aa
AA seq
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MVQRGPRGRGAEARREPCAPLPARDTEPAWCKTPSGHIKRPMNAFMVWSQHERRKIMDQW
PDMHNAEISKRLGRRWQLLHDSEKIPFVREAERLRLKHMADYPDYKYRPRKKGKVGTGAA
RPRLPVKIKPSVLGRVSASRRQPAKLPTGPDTPQEPATEVPAEDSPVVPGTAAWHPAPDG
EHSPQEPPAPLSPTTPCPEPGRSPESGSPSPMSAGSPPSSFSSSDEELEEELLGILPGRA
PASATCGALDWSVFDKDHDLFPRGGSSHFEFPDYCTPEVTEMIAGDWLMSSISDLVFTY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcgcggcccgcggggccggggcgcggaggctcggcgggagccctgcgcccca
ctgcccgcccgtgacaccgagcccgcctggtgcaagacgccgagcgggcacatcaagcgg
cccatgaacgccttcatggtgtggtcccagcacgagcgccgcaagatcatggaccagtgg
cccgacatgcacaacgccgagatctccaagcgcctgggccgacgctggcagctcctccac
gactccgagaagatcccctttgtcagggaggccgagcgcctgcgcctcaagcacatggct
gactaccccgactacaagtaccggcctcggaaaaagggcaaggtgggcaccggcgcagcc
cgtccgcggctcccagtgaagatcaaaccctccgtgttgggccgtgtctcagccagccga
aggcagcccgccaagctgcccaccggccccgacaccccgcaggagcccgcaacagaggtg
cccgctgaggacagccctgtggtgcctggcacggctgcctggcacccggcacccgacggg
gagcacagcccccaggagccccctgcacccctgagccctaccacaccctgcccggagcca
gggaggtccccagagagcgggtccccctctcccatgtcggctgggtcccctccctcttcc
ttcagctcctccgacgaggagctggaggaagagctgctggggatcctgcccgggcgggcg
cctgccagcgccacctgtggtgccctggactggtccgtcttcgacaaggaccacgacctc
ttcccgcggggaggctcctcgcacttcgagttcccggactattgcacgcccgaggtgacg
gagatgatagcaggggactggctcatgtccagcatctcggacttggtctttacctactga
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