Aphelocoma coerulescens (scrub jay): 138121223
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Entry
138121223 CDS
T10543
Symbol
POLA1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138121223 (POLA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoe03032
]
138121223 (POLA1)
Enzymes [BR:
acoe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
138121223 (POLA1)
DNA replication proteins [BR:
acoe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
138121223 (POLA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
138121223
NCBI-ProteinID:
XP_068890648
LinkDB
All DBs
Position
1:complement(13232273..13420298)
Genome browser
AA seq
1508 aa
AA seq
DB search
MAESGARGRDAMDESGSFAASRSRRERKNRRGQQEALERLKKAKAGEKLKYEVEEFTGVY
DEIDEDEYSKMVRDRQDDDWIVDDDGIGYVEDGREIFDEDLDDDALSSNKKGKGGKTSTT
GKKNVKKSVVSKPNTIKSMFIASAGKKNTDKTVDLSKDDLLGDILQDISAETVQLSPPPI
IMLKRKRSAGVPLNPFSVQSQTSKVVTPISKKAPAHVRKEALPPASFHPKHPNYTAKSVR
VSENEDTKHVQKPVENEGRVKAVGEKATKVLPAALPDDDQGMMDFDEEDFDEPMEAEHVE
TIPETAESLKRDDEIEKKETEQLESEKKETSVLNCSLPGLSCWDRIDEDEADLVAAEVQL
DPNLLPLVNGESDDQVLRFYWLDAYEDQFSQPGVVFLFGKVWIESATTYVSCCVTVKNIE
RTVYLLPRETEIDLSTGKEMETPVTIMSVFKEFNDSISPKYKIMKFKSKKVEKYYAFEIP
DVPAKSEYLEVKYSAECPRLPQDLKGQTFSHVFGTNTSSLELLLMSQKIKGPCWLEIKNP
QPSNQPVSWCKVEAVAMKPGLVNVVKDLSPPPPLVVMSFSMKTIQNPKTHQNEIVAVAAL
VHQKFPLDKAPPQPPFQTHFCAVSKPSDCIFPYDFKEAVKKKNAKIEIAATERTLLGFFL
AKIHKIDPDVVVGHNIYGFDLEVLLQRINLCKVPHWSKIGRLRRSNMPKLGGRGGFAERN
AACGRMICDVEISAKELIRCKSYHLSELVHQILKTERVTILPEEIRNLYSDSPRLLFMLE
NTWTDAKFILQIMCELNVLPLALQITNISGNVMSRTMMGGRSERNEFLLLHAFHEKDYIV
PDKQVFKKPPQKLVDEDEDFEDQNKSKIGKKKAAYAGGLVLDPKVGFYDKFILLLDFNSL
YPSIIQEFNICFTTVQRLSSEAQKRAEVEEEEEIPELPDPSLEMGILPKEIRKLVERRRQ
VKQLMKQPDLNPDLYLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREIL
MHTKEMVQKMNLEVIYGDTDSIMINTNSTNLDEVFKLGNKIKSEVNKLYKLLEIDIDGIF
KSLLLLKKKKYAALTVEPIGDGKYVTKQELKGLDIVRRDWCDLAKQTGNYVIGQILSDQP
RDIIVENIQRRLIEIGENVVSGQIPANQFEINKALTKDPQDYPDKKTLPHVHVAMWINSH
GGRKVKAGDTVSYIICQDGSDLSASQRAYALEQLKKQENLKIDTQYYLSQQIHPVVARIC
EPIEGIDSVLIATWLGLDPSQFRVHHRYHKDEENDALVGGPAQLTDEEKYKDCERFKFCC
LKCGTENIYDNVFDGSGRFIEPSLQRCSKTECEEPPFSYVVQMNNKLLLDIRRYLRKYYS
GWLICEEPTCQNRTRRLPLSFSRSGPVCQACRKAVLRPEYSDKALYTQLCFYRYIFDVDY
AMDKVVTEEDKEYLKKKPLRTEVSEAYKRLKSTVDKCLSMSSYSEVNLGKLFTISIGRSV
GESNNERQ
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagcggcgctcggggccgggacgctatggatgagtctggaagttttgcagca
tcacgttctagacgtgagaggaagaatagaagaggccagcaagaagcacttgaacgtctg
aaaaaagccaaagctggggaaaaattaaaatatgaggttgaggagttcacaggtgtttat
gatgaaatagatgaggatgaatactccaagatggtcagagaccgtcaggatgatgactgg
attgttgatgatgatgggataggttatgtagaagatggaagggaaatctttgatgaagat
ctggatgatgatgctcttagttccaataagaaaggaaaaggtggcaaaacatctacaact
ggtaaaaagaatgtgaaaaagtctgtggtgtcaaagccaaacacaattaagtctatgttt
atagctagtgctgggaagaaaaacacagataaaactgtggacctgtccaaggatgattta
cttggggatattcttcaagatattagtgctgaaacagttcaactaagtccaccaccaatt
ataatgctgaaaaggaaaagatctgctggagttccactcaatcctttctctgtgcagtcc
caaacttctaaggtagtcacccctatatcaaagaaagcgcctgctcatgtcagaaaggaa
gctcttcctccagcttcatttcatcctaaacatcccaattatacagcaaaatctgtcaga
gtctctgaaaatgaggacacgaagcatgtgcagaaacctgtggaaaatgagggaagagtg
aaggcagtaggagagaaagctactaaagttctacctgcagcacttccagatgatgatcag
ggaatgatggattttgatgaggaggactttgatgaacctatggaagcagagcatgtggaa
actatacctgagacagctgaaagcttgaaaagagacgatgaaattgaaaagaaagagaca
gagcagctggaatcagagaaaaaagagacatctgtcttgaattgttctctcccaggtctc
tcatgttgggacagaattgatgaggatgaagctgatctagtagcagcagaagttcagctg
gaccccaatctccttccacttgtgaatggggaaagtgatgatcaagttttaagattctat
tggctggatgcttatgaagatcagttcagtcagccaggtgtggtatttttgtttggcaaa
gtttggattgaatctgcaaccacctatgtcagctgttgtgtgacagtgaaaaatattgag
agaactgtttatctgctgccacgtgaaacagaaatcgacctatctactggcaaagagatg
gagactccagtaactataatgagtgttttcaaggaatttaatgacagcatttcaccaaag
tacaagatcatgaagttcaaatccaagaaagtggaaaaatactacgcttttgagattcct
gatgtaccagcaaaatctgaatacctagaagttaaatattcggctgaatgccctcggctt
ccccaagatctgaagggacaaacattttcacatgtgtttggaaccaacacctctagcctg
gaacttctcttgatgagtcagaagatcaaaggaccctgctggctggaaataaaaaatcca
cagccttcaaatcagccagtcagctggtgtaaagtggaggctgtggccatgaagcctggc
ttggtgaatgtggttaaagatctttctcctcctcctcctctggtggtcatgtccttcagc
atgaagaccattcagaacccaaagactcaccagaatgagattgtggctgttgcagctctt
gttcatcagaaatttcctttggataaggctccacctcagcctccttttcaaacacacttc
tgtgctgtttccaaaccaagcgattgcatttttccttatgacttcaaagaagctgttaaa
aagaagaatgctaaaatagaaattgctgcaacagagagaacactgctgggatttttcctt
gcgaagattcacaaaattgacccagacgttgttgtgggtcataatatttatggatttgat
ctggaagtgctgcttcaaagaattaatttgtgcaaagtccctcactggtccaagataggt
cgactgaggaggtctaatatgccaaagcttgggggtcgaggagggtttgctgaaaggaat
gctgcctgcggtcggatgatctgtgatgtagaaatttctgctaaagaactaattcgttgc
aaaagttaccatttgtctgaactggtccatcagattttgaaaacagagagggtaacaatt
ctgccagaggaaattcgaaatctgtacagtgattctcctcgcttactgttcatgctggaa
aacacctggacagatgccaagttcattctccagatcatgtgtgagctgaatgtcctgcca
ttggctcttcagataacaaacatctctgggaatgtcatgtccaggacaatgatgggcgga
cgatctgaacgcaacgagttcctgctgcttcacgcctttcatgagaaggactacatagtg
ccagacaaacaagttttcaaaaagcctccacagaagttggtggatgaagatgaagatttt
gaagatcagaataaatcaaagatagggaaaaagaaagcagcatatgctgggggcttagtc
ttggatcccaaagtcggtttttatgacaagtttattttgcttctcgacttcaacagcttg
tacccatcaattattcaggagttcaacatctgctttaccacagtgcagcgactgtcatca
gaagcacagaaaagggcagaggtcgaagaagaggaagaaattccagagcttccagaccca
tctctggaaatgggaattttgcctaaagaaatcaggaaactggtggagagaagacgccaa
gttaagcagttaatgaaacagccagatttaaatcctgacctctatttacagtatgatatc
agacagaaagctttgaaactcactgctaacagcatgtatggctgcttgggattttcctac
agcagattctacgccaagcctttggctgctttggtgacgcataaggggagagagattttg
atgcataccaaggagatggtgcagaagatgaacctagaagtgatttatggagacacagat
tccattatgataaacactaatagcaccaatttggatgaggtcttcaagctggggaataag
atcaaaagtgaagtgaacaagctgtacaaattgttggaaatcgatattgatggaattttt
aagtccttgctgttgttaaagaagaagaaatacgctgctctgactgtggaaccaatagga
gatgggaaatatgtaactaagcaagaactgaaagggttggatatagtccggagagactgg
tgtgatcttgcaaaacagactggaaactatgtaattggtcagattctttctgatcagccc
cgagatataatcgtggaaaatattcaaaggcgacttatagaaattggagaaaatgtggtc
agtggtcagatcccagctaatcagtttgaaataaacaaggcattgaccaaagatccccag
gattatcctgacaaaaaaaccttgccacatgtgcatgttgccatgtggataaactctcat
ggaggccgaaaggtgaaggcaggagacacagtgtcatatatcatttgtcaggatggatca
gatctcagtgccagccagcgagcatatgctctggaacagttaaaaaagcaagaaaatctt
aaaattgatactcagtactacctgtcacagcaaatacatccagtagttgctagaatatgt
gagcccatagagggaattgattctgttcttattgcaacgtggttaggactggatccctcc
caattcagagtccatcaccgttaccataaagatgaggagaatgatgccttggttggtggc
ccagctcagctcactgatgaggagaaatataaggattgtgaaagattcaagttttgctgc
ctcaaatgcggaacagaaaatatttatgacaatgtctttgatggttcggggcgatttatt
gaacccagcttgcagaggtgcagcaagacagaatgtgaagagcctcctttcagctatgtg
gttcaaatgaacaacaagttactactggatattagacgctacctcagaaaatactacagt
ggttggttaatatgcgaggagccaacttgccagaatcgaacccgtcggcttccactgagt
ttttcccggagtggccccgtgtgccaggcctgcaggaaggctgttctgagaccagagtat
tctgataaggccctgtacactcagctctgcttctaccgatacatttttgatgtggactat
gcgatggataaagtggttactgaggaagacaaagagtatttgaagaagaagccactcagg
acagaagtctctgaggcctacaaaagactgaagagcaccgtagacaaatgcctgtccatg
agtagctactcagaagtgaaccttggcaaactcttcaccatcagtataggaagatctgtg
ggagagtccaataatgaaagacagtga
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integrated database retrieval system
