Aphelocoma coerulescens (scrub jay): 138121324
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Entry
138121324 CDS
T10543
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138121324
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138121324
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138121324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
AAA_13
CorA
zf-RING_10
U-box
ATG17_like
Prominin
KxDL
zf-ANAPC11
Phasin
RTP1_C1
DUF4795
Fib_alpha
V_ATPase_I
PilJ
zf-Nse
DUF1664
GlgE_dom_N_S
Motif
Other DBs
NCBI-GeneID:
138121324
NCBI-ProteinID:
XP_068890830
LinkDB
All DBs
Position
21:340588..347472
Genome browser
AA seq
475 aa
AA seq
DB search
MACSLKDELLCSICLSIYQDPVGLGCEHYFCRRCITEHWVRQEPQGTRDCPECRRTFPEP
TLAPSLKLANIVERYSAFPLDAILGAQRSPFPCKDHEKVKLFCLTDRAVVCFFCDEPAVH
EQHQVTNVDDAFEELQRELKEQLQGLQESERGHTEALQLLKKQLAETKSSAKSLRATIGE
AFERLHRLLRERQKAMLEELEADTARTLSDIEHKIQRYSQQLRKVQEGTQILKERLAEAD
KHVFLAGVASLSERLKGKIHETNLTYEDFPTSKYMGPLQYTIWKSLFQDIHPVPAALTLD
PGTAHHRLILSDDCTIVAYGNLHPQPLQDSPRRFDVEVSVLGAEAFGAGVHYWEVVVSEK
TQWMIGLAHEAVTRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVKGKLEKVGVFL
DYDKGLLIFYNADDMSWLYTFRERFPGKLCSYFSPGQSHANGKNVQPLRINTVRI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcagcctcaaggacgagctgctgtgctccatctgcctgagcatctaccaggac
ccggtggggctgggctgcgagcactacttctgccgccgctgcatcaccgagcactgggtg
cgccaggagccgcagggcacccgcgactgccccgagtgccgccgcaccttccccgagccc
acgctggcccccagcctgaagctggccaacatcgtggagcgctacagcgccttccccctg
gatgccatcctgggcgcccagcgcagccccttcccctgcaaggaccacgagaaggtgaag
ctcttctgcctcaccgaccgtgccgttgtctgcttcttctgtgatgagccggccgtgcac
gagcagcaccaggtcaccaacgtggatgacgccttcgaggagctgcagcgggagctgaag
gagcagctccaggggctgcaggagagtgagcgtggccacacggaagccctgcagctcctc
aagaagcagctggccgagaccaagtcctcagccaagagcctgcgggcgacgatcggggag
gcgttcgagcggctgcaccggctgctgcgggagcggcagaaggcgatgctggaggagctg
gaggccgacacggcgcggacgctcagcgacatcgagcacaagatccagcgctacagccag
cagctccgcaaggtccaggagggcacccagatcctgaaggagcgcctggccgaggcggac
aaacacgtcttcctggccggcgtggcgtccctgtccgagaggctgaaggggaagatccat
gagaccaacctgacttacgaggacttccccacctccaagtacatgggcccactgcagtac
accatctggaaatccctcttccaggacatccatcccgtgccagcagcgctgacgctggac
cctggcactgcccaccaccgcctcatcctgtcagacgactgcaccatcgtggcctacggc
aacctgcacccgcagccactgcaggactcgccccggcgcttcgacgtggaggtgtcggtg
ctgggcgccgaggccttcggcgctggcgtgcactactgggaggtggtggtgtccgaaaaa
acccagtggatgatcggcctggcccacgaggctgtgacccgcaagggcagcatccagatc
cagccgagccgcgggttctactgcatcgtgatgcacgacgggaaccagtacagcgcctgc
accgagccctggacgcggctcaacgtcaagggcaagctggagaaggtgggcgtcttcctg
gactatgacaaggggctcctcatcttctacaacgccgatgacatgtcctggctctacacc
ttccgggagaggtttcccgggaagctgtgctcgtattttagtcctgggcagagccatgcc
aacgggaagaacgtccagccgctgcggatcaacactgtccgcatctaa
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