Aphelocoma coerulescens (scrub jay): 138121402
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Entry
138121402 CDS
T10543
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Chromosome and associated proteins [BR:
acoe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138121402 (CHD5)
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GFIT
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NCBI-GeneID:
138121402
NCBI-ProteinID:
XP_068890978
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Position
21:5265326..5288726
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AA seq
1958 aa
AA seq
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MRGPAAARELLDDADNEEDVSEEDDGVLEGLDEFFAEDQVVVPKKKKSKKLKDGKAAKIK
RRKKEGSNDEMSENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNE
DGSLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPALPASPQHSALPTVVRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSMRSECSAGLGKRGKKRKKKKRSEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPL
PPVLPATDPELALPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDK
KGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGK
KLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMVSQGQRIAVPDAVTPFSDTLSTKGGAATPGMKKKHGGTPPGDNKDVDDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVLEGPESKRSSEVVSSDPNTPVPASPAHMH
TGPGALADKIEAQLGFHEEKEPVEQKPRKVIDSQVPASAEVESEEHPESCDSKERPREEK
QEDCEKAEPSSEPLVKGLFPPANEGIQEQEKPLEKAELSSSPGKGEDKEVKPEDGKEEEK
EQNDAQQNGDKEEEEEGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDI
WHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKL
LEQALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANA
VLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGS
FGSSQIFNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcggccgcccgggagctgctggacgacgcggacaacgaggaggacgtg
tcggaagaagatgatggggtgctggaaggattggatgagttttttgcagaagaccaagtc
gtggtaccgaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagaaaatgaagaggagatcgaggag
aaatcagaaagtgaagggagtgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaagaaggagaaaaagccaaaacggaagaagaaggatgaagaggaggatgacaatgag
gatggaagtctaaaggagcccaagagctcagcccagctcatggaagaatggggcctcgat
gacgtagattacgttttctcagaagaggattatcatactctgacgaattacaaggctttc
agccagttcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgacggtgctcggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggctgcggcagctgtggctgcagccgtggagactgtcaccatcgccccg
gcgctccccgccagcccccagcactctgccctgcccaccgtcgtcagaaaggccaagacc
aaggaggggaagggtccaggtgtgcggaagaaaatcaagggctccaaagacgggaagaaa
aaagggaaggggaaaaagatggcaggcttgaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctctagcgaagaggaggaacgggaagaatccgacttcgacagcgcc
agcatcaacagctcctccatgcgctctgagtgctcggctggcctggggaagagagggaag
aagaggaaaaagaaaaagaggagtgaagagggagacgggtacgagacggaccaccaggac
tactgtgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgcccccgcgcc
taccacctggtctgcctggaccccgagctggagaaggcccctgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccaaaggaggaggaggaggaggaagag
gatggtggcgaggaggaggaggatgaccacatggagttctgccgggtctgtaaggacgga
ggggagctgctgtgctgcgacacctgcccatcctcctaccacctccactgcctgaacccg
ccgctgccagagatcccaaacggtgaatggctctgcccacgctgtacatgccctcccttg
aagggcaaagtccaacgcatcctgcactgggcctggaaggagccaccggccgccccgctc
ccacccgtgctgcccgccacggacccggagctggctctgcccccgcccaaggtgctggag
gggatcccggagcgcgagttctttgtgaagtgggcaggcctctcctactggcactgctcc
tgggtcaaggagctgcagctggaactgtaccacaccgtgatgtaccgcaactaccaacgg
aagaatgacatggatgagccaccagccttcgactacggctctggggacgaggacagccag
agggagaagcggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgc
tatggcatcaagcctgagtggatgatgatccaccgcatcctgaaccacagctttgataaa
aagggagacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgg
gagatcgatgacatagacatcccctactacgagaacctcaaactcctctactggaaccac
agggagctgatgctgggggaggacacacgccctctgaagaagctgaacaagaaagggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacggtg
aagtttgacaagcagccgtggtacatcgatgccacgggaggcacgctgcacccttaccag
ctggaagggctgaactggctgaggttctcctgggcacaagggacagatacaatcctggct
gatgagatggggctggggaagacggtgcagaccattgtgttcttgtactctctgtacaag
gagggccactcgaaagggccgtacctagtcagtgcccccctctccaccatcatcaactgg
gagcgtgagtttgagatgtgggcacctgatttctacgtcgtgacctacacgggggacaag
gagagccggtcggtgatccgggaaaatgagttttcttttgaagacaacgccatacggagc
gggaagaaagtcttccggatgaagaaggaagcccagatcaagttccatgtcttgctcacg
tcgtatgagctgatcaccattgaccaggctgtgctgggctccatagagtgggcctgtctg
gtggtggatgaagcacacaggctgaagaacaaccagtccaaattctttagagtactgaat
agctacaagatcgattacaagctgcttctcacagggactccgctccagaacaacttggaa
gagctcttccacctgctcaatttcctgactccagagaggtttaacaacctggaggggttc
ctggaggagtttgcagacatctcaaaggaggaccagatcaaaaagctccatgacctgctg
ggtccccacatgctgcggcggctcaaggccgatgtgttcaagaacatgccggccaagacg
gagctgatcgtgcgagtggagctgagccagatgcagaagaagtactacaaattcatactg
acgaggaacttcgaagccctgaattcgaaaggtggtgggaaccaggtctcactgctcaac
atcatgatggacctgaagaagtgctgcaatcacccatacctgttccctgtggcagctgtg
gaggccccagtgctgcccaatggatcttatgacgggaattctttggtcaaatcttctggg
aaactgatgctgctccaaaagatgctgaagaagttacgggatgggggtcacagagttctg
atcttctcacagatgacaaagatgctggatttgctggaggatttcctggagtatgaaggc
tacaagtacgagcggatcgatgggggcatcaccggcggcctgcgccaggaggccatcgac
aggttcaatgctcctggggctcagcagttctgcttcctcctctccacccgcgccggtggt
ctgggcataaaccttgctacggccgacactgtcattatttatgattctgactggaatccc
cacaatgacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatg
atttaccgcttcgtgaccagggcctctgtggaggagcgcatcacccaggtggccaaaagg
aagatgatgctcacccacctggtggtccgcccggggctcggctccaagtcgggctccatg
accaagcaagagctggacgacatcctcaagtttgggacagaagaactcttcaaggatgat
gtggagggcatggtgtctcagggacagcggattgccgtgccggatgctgttacccctttc
tcggacacgctctcaacaaaagggggtgcagcaactcctggcatgaaaaaaaagcatggt
ggcaccccaccaggtgacaataaggatgtggatgacagcagtgtgatccactacgacgat
gctgccatctctaagcttttggaccgaaaccaggatgcgactgatgacacggagctgcag
aacatgaatgagtatctcagctcctttaaagtggctcagtatgttgtgagagaagaggat
ggtgtggaggaggtggaacgtgagatcatcaagcaagaggagaatgtggaccctgactac
tgggagaagctgctgcggcaccactacgagcagcagcaggaagatctggccaggaacctg
gggaaagggaagagaatccgcaagcaggtcaactacaatgacacatcacaggaggaccaa
gagtggcaggacgagctctctgacaaccagtcagagtattccattggctctgaggatgag
gatgaagactttgaagagaggccagaaggccagagtggcagaagacaatcccggagacag
ctgaagactgacagagacaaacctctccctcctttgctggcaagagttggggggaacatt
gaggttctgggcttcaacgcccggcagcgcaaggcgttcctgaatgccatcatgcgctgg
ggaatgccgccccaggatgccttcaactcccactggctggtccgggatctgcgagggaag
agtgagaaggagttcagggcgtacgtctctctcttcatgagacacttgtgtgagcccggg
gcagatggtgccgaaacctttgcggacggcgttccccgggaagggctgtcgcgccagcac
gtgctgactcgcatcggggtcatgtcactagtaaggaagaaggtccaggagttcgagcat
gtcaatgggaagtacagcaccccagacctggttcttgagggcccggagagcaagagatcc
agcgaggttgtgtcttcagatcccaacacgcctgtcccggccagcccagcacacatgcac
acgggaccaggggcccttgcagacaaaatagaagcacaactggggttccatgaggaaaag
gagccggtggagcagaagcccagaaaggtgattgacagccaggtgcctgcaagtgccgag
gtggagagcgaagagcacccggagagctgcgacagcaaggagaggccaagggaagagaag
caagaggattgtgaaaaggctgagccttcttctgagcccctggtgaaaggcctgttccct
cctgccaacgaggggattcaagagcaagagaagcctttggagaaggcggagttgagcagc
agcccagggaagggggaggataaagaagtcaaaccagaggatggcaaggaggaggagaag
gagcaaaatgatgcccagcaaaatggtgacaaagaggaagaggaggaaggaaagaaggat
gacagaaacatgaacttcagattcatgttcaacattgccgatggtggcttcacagagctg
cacacgctgtggcagaacgaggagagggctgccatgtcctctggcaagatctacgacatc
tggcaccgccgacatgactactggctgttggcaggaattgtcacccacggctatgcgcgc
tggcaggacatccagaatgacccacgctacgtgatcctcaacgagcccttcaagtcagag
atacacaaggggaactacctcgagatgaagaacaagttccttgcccggcggttcaagttg
ctggagcaggccctggtgatcgaggagcagctgcggagggcggcgtacctcaacatgacc
caagaccccagtcacccggccatggcgctgaacgcgcggctggcagaagtggagtgcctt
gccgagagccaccagcacctctccaaagagtccctggctgggaacaagcctgccaacgct
gtcctgcacaaggtgctgaaccagctcgaggagctgctgagtgacatgaaggctgatgtg
acacgcttgccctctatgctgtcccgcatcccgcccgtggctgcccggctgcagatgtca
gagcggagcatcctcagccgcctggccacccgtggaggggatccagctgcccagggctcc
tttggctcctcccagatcttcaacaacaactttgggccaaatttccgtggtcctgggcca
ggtgggattgtcaactacagccagatgcctctgggaccctatgtgactgatatttag
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