Aphelocoma coerulescens (scrub jay): 138121430
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Entry
138121430 CDS
T10543
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03013
Nucleocytoplasmic transport
acoe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138121430
03015 mRNA surveillance pathway
138121430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoe03019
]
138121430
Enzymes [BR:
acoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138121430
Messenger RNA biogenesis [BR:
acoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138121430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
138121430
NCBI-ProteinID:
XP_068891033
LinkDB
All DBs
Position
21:complement(1900405..1910283)
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AA seq
479 aa
AA seq
DB search
MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggccgtggacgagcaggaggcggcggccgagtcgctg
agcactttacacctgaaggatgaaaaaaccaaaccagatgccaatggtgccgttgtcaag
gcagatgacaatgtggagaagacggaggatgaggagaaggaggacagagctgcccagtcc
ttactgaacaagctgatccgcagtaacctggttgacaccacaaatcaggtggaggtgctg
cagagggaccccacatcacccctctactccgtcaagtctttcgaggagctgcgcctgaag
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatctaagatccaagag
aatgccctgcccatgatgcttgctgaacccccgcagaacctcatcgcacagtcgcagtct
ggtactggcaagacagctgccttcgtcctggccatgctcagcagggttgagcctgggaac
aagtatccacagtgtttgtgcctttccccaacatacgagctggcacttcaaacagggaaa
gtgattgaacagatgggaaacttctacccagagctgaaacttgcgtacgctgtccgaggc
aacaaactggagagggggcagaagatctcggagcagatcgtaatcggcacacccggcacc
gtgctggactggtgttccaaactgaagttcatcgatcccaagaagatcaaggtgtttgtg
ctggatgaggcggatgtgatgatcgcaacccagggccaccaggaccagagcatccgcatt
cagagaatgcttcccagggactgccagatgctcctgttctcagctacttttgaggattct
gtgtggaagtttgctcaaaaagttgttcctgacccaaacattatcaaactgaagcgcgag
gaggagaccctggacaccatcaagcagtattatgttctgtgcaataacagagatgagaag
ttccgggccctctgtaacatctacggcgccatcaccatcgcccaggccatgatcttctgc
cacactcggaagacggcggggtggctggcggcggagctgtccagggagggccatcaggtg
gcattgctcagcggggagatgatggtggagcagagagctgccgtgatcgagcgcttccga
gagggcaaggagaaggtgctggtgaccacaaacgtctgtgccagagggatcgatgtagag
caggtctctgttgttatcaattttgaccttcctgtggacaaggatggaaatccagacaac
gagacctacctgcaccggatcggccgcaccggccgcttcggcaagcgagggctggccatt
aacatggtggacagcaagcacagcatgaacattctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgacgacttggatgaaattgagaagataaataactga
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