Aphelocoma coerulescens (scrub jay): 138121504
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Entry
138121504 CDS
T10543
Symbol
CLCNKA
Name
(RefSeq) chloride channel protein ClC-Ka isoform X1
KO
K05017
chloride channel Ka
Organism
acoe Aphelocoma coerulescens (scrub jay)
Brite
Ion channels [BR:
acoe04040
]
Chloride channels
Chloride channel (CLC)
138121504 (CLCNKA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF4220
DUF2813
DruA
Motif
Other DBs
NCBI-GeneID:
138121504
NCBI-ProteinID:
XP_068891184
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All DBs
Position
21:845893..850905
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AA seq
687 aa
AA seq
DB search
MERPLPGGARGEKEEKEEERVLVSEHSWRPCPTARRRLRGCLEWVKRQLFRVGEDWYFLF
ILGVLMATISFTMDIIVARLYAAHTWLYREIGDIGVLKYLSWTLYPTALAAFSTGFSQSI
TPHSGGSGIPELKTILMGVVLEDYLAIQNFGAKVVGLTCTLVCGSTLFLGKVGPYVHLSA
MAAAYLGKMRTTVTREYENKFKQHEMLVAAQAVGVATVFGAPISGVLFSIEVMSPHFAVR
DYWRGFFAATCGAFMFRLLAVFNSEQETIAAVFKSDLQIDFPFDLLETFFFVILGTICGI
VACAYLFCQRWTMVAVKKNWLTAKLLATDKPVYTVLVVLLLASITFPPGLGQFMASRLTM
KEYLTSLFDSRTWGTLAPNASGMAKPGGLWQEWDHPSATIYGTLTFFLLMKFWMLILATT
LPLPAGYFMPIFIYGAAIGRLMGEVVALLFPRGLHSEGPPRPIIPAGYALAGAAAFAGSV
THAVSTALLVCEATGHLGHVLPTVLAVLVANAISQKNQPSFYDAGIIVKKLPYLPPIRSR
HIASYRVAVEEFMERQVVALAKGDGFQEVLVALDASADTEYPVVESTGSPTLVGTVSRSQ
LVTFLQSHEHPQAPQGEKLATVGTLGDDCAIEPIMLQFSPWTSLHQAYHLFQLLKLQRVF
VTRSGELVGAVSRAELRRAIEELANPK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggagcgacccctccccgggggggcgcggggggagaaggaagagaaggaggaggagagg
gtgctggtgtcggagcacagctggagaccctgccccaccgcccggagaaggctccgaggg
tgcttggagtgggtgaagcggcagcttttccgcgtcggggaggattggtacttcctcttc
atcctgggggtcctcatggccaccatcagcttcaccatggacatcatcgtcgccaggctc
tacgcggcccacacgtggctgtaccgagagattggggacatcggggtgctcaagtacctc
tcgtggaccctgtaccccacggccctggccgccttctccaccggtttctcccagagcatc
accccgcactccggaggctccggcatcccagagctgaagaccatcctgatgggcgtggta
ctggaggactacctggccatccagaacttcggagccaaggtggtggggctgacctgcacc
ctggtgtgcggcagcacccttttccttgggaaagtgggtccctatgtccacctctccgcc
atggccgcagcatatctggggaagatgaggaccacggtcacgagggagtatgagaacaag
ttcaagcagcacgagatgctggtggcagcacaagccgtcggggtggccacagtcttcggg
gcgcccatcagcggggtgcttttcagcatcgaggtgatgtccccccactttgccgtgcgg
gattactggcgtggctttttcgccgccacctgtggcgccttcatgtttcggctcctggcc
gtgttcaacagcgagcaagaaaccattgccgctgtttttaagagtgacctccagattgat
tttcccttcgacctcctggagacctttttttttgtgattttggggaccatctgcgggatc
gtggcctgtgcttatctcttctgccagcgctggacgatggtggccgtcaagaagaactgg
ctgacggccaagctcttggccaccgacaaacccgtgtacacagtgctggtggtgctgctg
ctcgcctccatcaccttcccacccggcctggggcagttcatggcctccaggctcaccatg
aaggaatatctcacctccctcttcgacagccgcacgtggggcacgctggcccccaatgcc
tcggggatggccaagcctggggggctctggcaggagtgggaccatccctctgccaccatc
tacggcaccttgaccttcttcctgctcatgaagttctggatgctgatcctggccaccacc
ctgcccctgccagccgggtacttcatgcccatcttcatctatggagcggccatcgggcgc
ttgatgggggaggtggtggccctgctcttcccacgggggctccattcggaaggaccccca
cggcccatcattcctgctggctacgccctggccggcgcagccgccttcgcgggctcggtg
acccacgccgtgtccacggccctgctggtgtgcgaggccaccgggcacctgggccacgtc
ctgcccaccgtgctggccgtgctggtggccaacgccatcagccagaagaaccaaccgtcc
ttctacgacgccggcatcattgtcaagaagctgccctacctgccccccatccgcagccgg
cacattgcctcctaccgagtggcggtggaggagttcatggagcgccaggtggtggccttg
gccaagggggacggtttccaggaggtgctggtggccttggatgcctctgctgacaccgag
taccccgtggtggagagcacagggtcccccacgctggtgggcaccgtcagcaggtcccag
ctggtcaccttcctccagagccacgagcaccctcaggccccccaaggggagaagctggcc
accgtggggacgctcggggacgactgtgccatcgagcccatcatgctccagttctccccg
tggacctccctgcaccaggcctatcacctcttccagctgctgaagctgcagcgagtcttt
gtcacccgctctggggagctggtgggagccgtgagcagggcggagctgcggagagcgatc
gaggaactcgccaaccccaagtga
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