Aphelocoma coerulescens (scrub jay): 138121522
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Entry
138121522 CDS
T10543
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04120
Ubiquitin mediated proteolysis
acoe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138121522 (UBE4B)
04120 Ubiquitin mediated proteolysis
138121522 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acoe04121
]
138121522 (UBE4B)
Enzymes [BR:
acoe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138121522 (UBE4B)
Ubiquitin system [BR:
acoe04121
]
Ubiquitin ligases (E3)
U-box type E3
138121522 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
138121522
NCBI-ProteinID:
XP_068891218
LinkDB
All DBs
Position
21:8547054..8584227
Genome browser
AA seq
1393 aa
AA seq
DB search
MQNSGRAASPAPLSRLQVRLQSLPLQEPVPAVREGRGAAPELCRRAGHASRGVHSGFSPL
QIRRRRLARLAGGSSSQPTTPLTSPQRETPPGPPGAAPAPGPSHSLGLSVHSMTPATSPI
GASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVDSGIE
NMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFLNSLSAQF
KQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPDRSLILNM
GSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSVATTAVPP
ITVSSHLPAASPSWTQPSSPRYRPYTVAHSGGFAASSIPRSLSISIPSSSPSPPAMPVST
SRHRPTAMGPPLFTASPGALRRRPSLQSRIPPSLYDNPFSFLLLAVSDVSEDSSDEENED
DDFSCVQFGSSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMC
SQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRT
TYQDEEVFKQIFIPILQGLALASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVS
LPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQS
LQHYLELARQELFKILHSILLNGETREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFML
NFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVAAWIAELYRDPSPF
SEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATR
HREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNVKLP
LTPEVPKVFAALPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNP
YLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYD
KFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRI
HEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPF
LRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFA
KAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDA
PDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKE
QIQAWMRDKQNDH
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagcgggagggcagcaagcccagctccactgagcaggcttcaggtaaggctt
cagtctttgcctttgcaggagccggtccctgctgtgagggagggccggggggcagccccg
gagctgtgcagacgggctggccatgcaagcagaggtgttcactcggggttctctcccctg
cagatccgtcgcaggcgcctggcgcggctggcgggaggctcctcgtcccagcccaccacc
cccctgacgtccccgcagcgagagaccccgccggggccgccgggcgcagccccagcgccg
gggccctcccacagcctgggcctcagtgtccacagcatgaccccagctacctctcccatc
ggtgcgtcaggagtagcccaccgaagccagagcagcgaaggagtgagttcactcagcagt
tctccatcaaacagccttgaaacccaatctcagtccctctctcggtctcagagcatggac
attgatagtgtctcctgtgagaaaagtatgtcccaggtagatgtggattcaggaattgag
aacatggaggttgatgagaacgatcgcagagagaaacggagtctgacggacaaggaacct
ctgtccgggtcggaagtgtctgaggaacaagctctgcagctggtctgtaagatcttcaga
gtctcttggaaggaccgagacagagacgttattttcctgaattcactctctgcccagttc
aagcagaacccaaaggaagtgttttcagattttaaggacttgattgggcagattttgatg
gaagtgctgatgatgtccacccaggcaagggatgagaacccctttgccagcctgacagcc
acatcccaacccattgctgcagctgcccgctctcctgacagaagcctcatcttaaacatg
ggctccaaccctggaagcagccccatgttctgtaatgtgggctcctttggttccagctcg
ttatccagtctctatgggactagtccagctcctcctaccaatttcacaagctatgtacca
atgactggttcatctcttaccccaccagccagttcagttgccaccacagcagtgcctccc
attactgtcagctctcacctcccagcagcaagcccctcctggacacagccttcctctccg
cggtaccggccatacaccgtggcccattccggaggctttgctgcttcttccatcccacgt
tccttgagcatttccatcccatctagttctccaagtcctccagccatgccagtcagcaca
tccagacacaggcccacagccatgggtccacctttgtttactgcttcacccggtgccttg
cgcaggcgtccttccttacagagcaggattcctcctagtttatacgacaaccctttctcc
ttcctccttcttgctgtttctgatgtgtctgaggacagtagtgatgaagaaaatgaagac
gatgatttttcttgtgtccagtttgggtccagtgtgggaggctctggcagctcgagtgtt
tctgattcctgcagtgaccacttcaccattgaaaactgtaaggagacagagatgctgaac
tacctcattgagtgttttgatagggttggaatagaggagagaaaagcaccaaagatgtgt
agccagccaacagttagccagttactgagcaacatccgatcccagtgcatttctcatgct
gctctggtgctacagggatccttaacacaaccaaggtcattgcagcagcagtctttgctg
gtaccatatatgctgtgtaggaatctcccatttggcttcattcaagaattggtgagaaca
acttaccaggatgaagaggtgttcaaacagatctttattcccatcttacaaggcctggct
ctggcttccaaagagtgttccctcgatagtgacaattttaaatatcctcttatggcacta
tgcgaactttgtgaaatcaagtttgggaaaacacaccctatgtgcagtttggttgtctct
ttgcccttgtggttgcctaaatctttaagcacaggtgcaggaagagaactgcaaagactt
tcctaccttggagccttcttcagcctctctgtctttgctgaagatgataacaaagtagtt
gagaagtacttctcggggcctgccattactcttgagaacacccgggttgttagccagtct
ttgcaacattacctggaattagcaaggcaagagctgttcaagatcctgcacagtatcctg
ctgaatggggaaacgcgggaggcagctctcagctacatggcagctgtggtcaatgccaac
atgaagaaggcccaaatgcagacagatgatcgtttggtgtctacagatggcttcatgctc
aactttctctgggtactgcagcaactaagtacgaagataaagctggaaacggttgatccc
atgtacatattccatcccaggtgtcgaatcgagcttcccacagatgagacaagagtgaaa
gcaacaatggaggaggttgcagcctggattgctgaactttacagggatccgtctccattt
tctgagccgaaattccccacagaatgtttcttcctcaccctgcacgcccatcacctctcc
atcctgcccagctgccgtcggtacatccggagactgcgggccatcagggagctcaacagg
actgttgaagatttgaaaaacaatgaaagtcagtggaaggattctcctctggccaccagg
catcgagagatgctgaaacggtgcaagacacagcttaagaaactggtgaggtgcaaggct
tgtgcagatgctggtttgctggatgaaaacttcctcaggagatgcctgaatttctatggc
atggtgattcagctgatgcttcgcattcttgaccctgcctatcccaacgtaaaattgcct
ttaactcctgaggttccgaaagtatttgcagcattgccagagttttacgtggaagatgtt
gctgaatttttattttttattgtacaatatgctcctcaggtgctgtatgagccctgtact
caggacatagtgatgttccttgttgtgatgctgtgcaaccagaactacatccgaaatcct
tatttagtagccaagctggtggaagtgatgttcatgacaaatccagctgttcagccccgg
acacagaagttctttgaaatgattgagaatcaccctctctccactaagttgttagtcccc
tccttgatgaagttttacacagatgtggagcataccggagccactagcgaattctatgac
aagtttacaatccgctaccacatcagcaccattttcaaaagcctctggcagaatatagct
caccatggtacatttatggaagagttcaactctgggaagcagtttgttcgctacatcaac
atgctgataaatgacacaactttcttgctggatgagagtctggagtccctaaaacgtatc
catgaagtgcaagaggagatgaagaataaagagcaatgggacctgctgcccagggatcag
caacaggcccggcagtcgcagctggctcaggatgagcgtgtgtcccgttcatatcttgcc
ctggcaacagaaactgttgatatgttccatatccttaccaagcaggtccaaaagcctttc
ctcagacctgaacttggaccacgactggctgctatgttgaactttaacctacagcaactg
tgtggccccaagtgccgtgacctgaaagttgaaaacccagagaaatatgggtttgaacca
aagaagctgttggaccaactgactgacatttatctgcagctggattgtgctcgctttgct
aaagcaattgctgatgatcagaggtcctacagtaaagagctctttgaggaggttatctcc
aaaatgaggaaggctggaatcaaatctaccatagcaatagagaaattcaaactgctggca
gagaaagtggaggaaattgttgccaagaacgcccgtgcagagattgattacagcgatgct
ccggatgaattcagagatccacttatggacactctgatgactgaccccgtgaggctgccc
tctggaactatcatggacaggtcaatcatcctgaggcatctgctgaactcttccactgat
cctttcaatcgtcagacgctgacggaaaatatgctggaaccagtgccagaacttaaagag
caaatccaagcctggatgagagacaagcagaatgaccattaa
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integrated database retrieval system
