Aphelocoma coerulescens (scrub jay): 138121638
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Entry
138121638 CDS
T10543
Symbol
PCNA
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe03030
DNA replication
acoe03410
Base excision repair
acoe03420
Nucleotide excision repair
acoe03430
Mismatch repair
acoe04110
Cell cycle
acoe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138121638 (PCNA)
03410 Base excision repair
138121638 (PCNA)
03420 Nucleotide excision repair
138121638 (PCNA)
03430 Mismatch repair
138121638 (PCNA)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
138121638 (PCNA)
09144 Cellular community - eukaryotes
04530 Tight junction
138121638 (PCNA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoe03032
]
138121638 (PCNA)
03400 DNA repair and recombination proteins [BR:
acoe03400
]
138121638 (PCNA)
DNA replication proteins [BR:
acoe03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
138121638 (PCNA)
DNA repair and recombination proteins [BR:
acoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
138121638 (PCNA)
MMR (mismatch excision repair)
Other MMR factors
138121638 (PCNA)
TLS (translesion DNA synthesis) factors
Other TLS factors
138121638 (PCNA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
FmdE
Motif
Other DBs
NCBI-GeneID:
138121638
NCBI-ProteinID:
XP_068891455
LinkDB
All DBs
Position
22:916326..919899
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AA seq
262 aa
AA seq
DB search
MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTY
RCDRNIAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAKDGVKFSANGELGNGNI
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYK
IADMGHLKYYLAPKIEDQQEGS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcgcggctggtccagggctcggtgctcaagcgagtgctggaggcgctcaag
gacctcatcaccgaggcctgctgggacctgggctcgggcggcatcagcctgcagagcatg
gactcttcacacgtctcgctggtgcagctcacgctgcgctcggagggcttcgacacgtac
cgctgcgaccgcaacatcgccatgggcgtcaacctgtccagcatgtccaaaatcctgaaa
tgtgcagggaacgaagacatcatcaccctgcgagccgaggacaacgcagacaccttggcc
ctggtgttcgaggcaccgaatcaggaaaaggtttctgactacgagatgaagctgatggat
ctcgatgtggagcagctgggaatcccagagcaggagtacagctgcgtggtgaagatgccc
tcggcggagttcgcccgcatctgccgggacctgagccacatcggcgacgctgtcgtcatc
tcctgtgccaaggacggcgtcaagttctcggccaacggcgagctgggcaacggcaacatc
aaactgtcccagaccagcaacgtggacaaggaggaggaggctgttacaatagagatgaac
gagccagtccagctgacctttgccctgaggtacctgaacttcttcaccaaagccaccccc
ctgtcccccacggtcacactcagcatgtctgcagacgttcctctggttgtggagtacaag
attgctgacatgggacacttgaagtattacctggccccaaagatcgaggaccagcaggaa
ggctcttaa
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