Aphelocoma coerulescens (scrub jay): 138121848
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Entry
138121848 CDS
T10543
Symbol
COL9A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04510
Focal adhesion
acoe04512
ECM-receptor interaction
acoe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138121848 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138121848 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138121848 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
acoe00535
]
138121848 (COL9A2)
Proteoglycans [BR:
acoe00535
]
Extracellular matrix (ECM) proteoglycans
Others
138121848 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
138121848
NCBI-ProteinID:
XP_068891832
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Position
23:complement(5763393..5783580)
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AA seq
690 aa
AA seq
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MARVTLVSQLWLLLQASCLCLAQLRGPPGEPGPRGPPGPPGVPGADGIDGDKGPAGAPGS
PGVKGEPGAPGPDGPPGKPGIDGLTGAKGEPGPIGRPGIKGQPGLPGPPGLPGPSLPGPP
GLPGQVGLPGEIGVLGPKGDPGPDGPRGPPGPPGKPGLPGHLQGLEGSADFLCPTSCPPG
PKGPQGLQGLKGHRGRPGALGEPGKPGVQGPKGDVGASGEQGVPGPPGPQGLRGYPGMAG
PKGEAGPAGYKGMAGSIGAAGRPGREGPKGPPGDPGDKGELGGRGIRGPQGDVGPKGENG
LPGIDGKDGTPGIPGVKSGMGQAGRPGTPGHRGQAGLPGQPGSKGGPGDKGEAGPRGHPG
VTGAPGQLGEPGPRGEQGPQGVPGLKGDRGERGLVGPPGEQGRAGPKGEQGPAGIPGPQG
LPGVKGDKGSPGKTGPKGSIGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGDLGFPGPSG
DAGAPGIRGYPGPPGPRGLVGERGVPGMPGPRGTAGRDAGDQHIVDVVLKMLQEQLAEVA
VSAKRAALGGVGAMGPPGPPGPPGPPGEQGPHGPMGPRGVPGILGAAGQIGNVGPKGKRG
EKGERGDVGRGHPGMPGPPGIPGLPGIPGHALDGKAGERGLPGSPGEAGKPGLPGPAGFP
GFCEPAACLGASAYAAARLTEPGSVKGPLY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcaccctcgtgtcgcagctctggctcctgctccaagcctcctgcctctgc
ctggctcagctccgagggccaccaggagagcccggcccacgagggccccccggtccccca
ggagtgccgggagccgatggcatcgatggtgacaaaggccccgctggagccccgggctct
ccgggtgtcaagggcgagcccggagcccccggtccggatgggcccccagggaagccgggc
attgatggcctgactggagcaaaaggcgagccaggacccatcggcaggcccggaatcaaa
ggccagcctggactcccagggccaccagggctccctggtccttccctgccaggaccccct
gggcttccaggccaggttggacttcccggggagatcggagtgctgggacccaagggtgac
cccggacccgacggccccaggggtcccccaggccctccagggaaacccggactcccagga
cacctccaaggcctggaaggcagcgctgatttcctgtgcccgaccagctgccccccaggc
cccaagggcccacagggactgcagggattgaagggacacagaggccgccccggcgccctc
ggagagcctggcaagccaggagtgcagggccccaagggggatgttggtgcctctggagag
caaggagtcccaggccctccgggacctcagggcctcagggggtatcccgggatggcagga
cccaagggcgaggcgggtcctgctggctacaagggcatggccgggagcatcggagcagcc
gggcggccgggcagggaaggccccaagggaccacctggggaccctggtgacaagggagag
ctgggtggccgtggcatcaggggaccccagggtgacgtcggccccaagggggagaacggt
ctcccgggcatcgatggcaaggatggcaccccagggatcccaggagtgaagagtggcatg
ggacaggctggacgcccgggaacgccgggacaccggggacaagctggcttgccgggccag
ccgggcagcaaaggtggccctggtgacaagggtgaagcgggtcctcggggccaccccggt
gtcaccggtgccccagggcagcttggcgagcccggacctcggggcgagcagggcccgcag
ggtgtccccgggctgaagggcgaccgcggcgagcgtggcctcgtggggccccccggggag
cagggcagagcggggccaaagggcgagcagggcccagcagggatcccaggaccccaaggt
ttgccgggagtcaaaggagacaagggatccccagggaaaactggccccaaaggcagcatt
ggagatcccggtgtccacggcctggcagggctcaagggagagaagggggaatcaggagag
ccgggacccaagggacagcaaggcatccagggagacctcggctttcccggcccctcgggg
gacgcaggagcaccgggaattcggggctatcccggcccccccggccctcgggggctggtg
ggggagcgcggagtgccgggaatgccgggccctcggggcacagccggccgggacgccggg
gaccagcacatcgtggacgtggtcctgaagatgctgcaagagcagctggcagaggtggcc
gtgagtgccaagagagccgccctgggtggggtcggggccatgggaccccccggccccccc
gggcccccaggaccccccggtgagcagggtccccacggccccatgggaccccgaggcgtc
cccggaatcctgggagctgccggccagatcgggaatgtcggacccaaagggaagagagga
gagaagggcgagaggggggacgttggccgtggccacccgggaatgccggggcctccaggg
atcccaggtctcccgggcattcctggccacgctctggatggcaaagcgggcgagcggggc
ctgccgggctccccgggcgaggctggaaaaccgggattgccgggccccgcgggattcccg
ggattctgcgagccggccgcgtgcctgggagcctcggcctacgcggccgcgcgcctcacg
gagccgggatccgtcaagggccccctgtactga
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