KEGG   Aphelocoma coerulescens (scrub jay): 138121967
Entry
138121967         CDS       T10543                                 
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
acoe  Aphelocoma coerulescens (scrub jay)
Brite
KEGG Orthology (KO) [BR:acoe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acoe03019]
    138121967 (ZC3H12A)
Messenger RNA biogenesis [BR:acoe03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     138121967 (ZC3H12A)
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 zf-CCCH zf-CCCH_4
Other DBs
NCBI-GeneID: 138121967
NCBI-ProteinID: XP_068892103
LinkDB
Position
23:complement(4293783..4301823)
AA seq 625 aa
MSAGSVAPGWPEALPAAARPAAGMSGSESPEGPGDGPELQLKVDFFRKLGYSSEEIRVVL
QKLGLGADTNTVLGELVKHGPAERDGPEAPPEPSEAPLVPRGGAGNKSPAPGPEETESDN
LKPIVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLIT
DQYILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERP
EWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVIPEHKKQQCPYGKKCTY
GIKCKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKGKRGSQAELLCSVPPESD
KSSLQKVSAERKSLAHKAKASDIPLQAKGCVSGSVSPDRYQQPHMDSLSYISQEHLDSGI
GSLENQLSDMWPHRCTGHCDHSHAEQVAVCTCGRQRPVYPHSPSLEQNGLISYKHGSHKS
SSSGASFLQYGPEMSHSGAPHSLSGYGVPVHPGTAGQYSLPSEFSAALPRSREFWSEPYA
LPQVRSPGVRDPRAVQRAPGPAYGDSGPWASSEQFAEERASVHVKLCGIFHPHLVDAVMS
RFPRLLDPQRLAAEILTYKAQNPGM
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgagcgcgggcagcgtcgccccgggctggcctgaggcgctgccggccgcggcccggcct
gccgcggggatgagcggcagcgagagccccgaggggcccggggacgggcccgagctgcag
ctaaaggtggatttcttccgcaagctcggctactcctcggaggagatccgcgtcgtgctg
cagaagctgggcctgggcgccgacaccaacacggtgctgggggagctggtgaagcacggc
ccggccgagcgggacggccccgaggctccgcccgagcccagcgaggccccactggtccct
cggggcggcgccggcaataagtccccggcgcccggccccgaagaaacggagagcgacaac
ctgaagcccatcgtcatcgatggcagcaacgtggccatgagccatgggaataaagaagtg
ttctcctgccgaggtatccttctggctgtccagtggttctgggacaggggacacaaggat
attacagtctttgtgccatcatggaggaaggagcagccccgaccagatgtactcataaca
gaccagtacattctgcgtgaccttgagaagaagaagatcctggtgttcacgccatcgcgg
cgggtcgggggcaagcgcgtggtgtgctacgatgaccggttcattgtgaagctggcgcac
gaatccgacggcatcgtcgtgtccaacgacacctaccgggatctgcagaacgagcggccc
gagtggaagaaattcattgaagagcgtctgctgatgtactcctttgttaatgacaagttt
atgcctccagatgatcccttagggcgtcatggccccagcctggataacttcctcaggaag
aaacctgtaattccagaacacaagaaacaacagtgcccttatgggaaaaaatgcacctat
ggaattaagtgtaagttctaccatcctgaaaggatcaaccagccccagcgctcgttagct
gatgagctccgtgccaacgcaaggctgtctccaaccagaagtaccagtgccaaggaggag
aaaaagggcaaaaggggttcccaggcagagctcttgtgctctgtgcccccagagagcgac
aaaagctctttgcagaaggtctctgcagagaggaagagcttggcgcacaaagccaaggcc
agtgacattccgcttcaggccaaaggctgtgtgtcaggcagtgtctcccctgacaggtac
cagcagcctcacatggactctctgtcttacatctctcaggagcatctcgactcaggcatt
gggtctctggagaaccagctgtctgacatgtggcctcacagatgtaccggtcattgtgac
cattcccatgcagagcaggtggctgtctgcacctgcggtaggcagagacctgtctaccca
cattctcccagcttagagcagaatggtctgatctcttacaagcatggctcccataaatct
tcttcctctggtgctagcttcttgcagtatggccctgagatgtctcactcgggggcaccc
cactctctctcaggctatggagtacctgtgcacccaggtactgcggggcagtacagcctg
cccagtgagttcagtgctgccctgccccgctctcgggagttctggtccgagccgtacgcg
ctgcctcaggtgagatcccccggtgtgcgcgacccccgtgcggtgcagagggccccgggg
ccggcgtacggggactcggggccctgggctagctcggagcagtttgctgaggagagggcc
agcgtgcacgtcaagctctgcggcatcttccacccacacctggttgatgctgtgatgagc
cgcttcccccggctgctggacccccagaggttggcagcagagatcctcacctacaaggcc
cagaacccaggtatgtga

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