Aphelocoma coerulescens (scrub jay): 138122031
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Entry
138122031 CDS
T10543
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
acoe Aphelocoma coerulescens (scrub jay)
Pathway
acoe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
acoe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138122031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acoe04131
]
138122031
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
acoe04031
]
138122031
Membrane trafficking [BR:
acoe04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
138122031
GTP-binding proteins [BR:
acoe04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
138122031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
AAA_24
Motif
Other DBs
NCBI-GeneID:
138122031
NCBI-ProteinID:
XP_068892210
LinkDB
All DBs
Position
23:complement(135846..137337)
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AA seq
215 aa
AA seq
DB search
MEQRWQYQFRVIMLGDSTVGKSSLLRRYTEGVFLDAVNQTVGVDFYVQFVELEPGLRVKL
QFWDTAGQERFRSVTRSYYRNSAGGMLLFDLTNRASFESIRRWHQEVTDTIQPFRMVFLL
VGHKSDLAGQRQVGQREAGKLAASLGVQYVETSAKDASNVVQAFQMLTVAIYQALQTGRL
VATEAWDGVKSSVPLPVLPKAQGLEKEEKQKRCLC
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacgatggcagtaccagttccgggtgatcatgctgggggactcgactgtgggg
aaatcctcactgctccggcgttacaccgagggcgtcttcctggacgctgtcaaccagacg
gtgggggtggacttctacgtccaattcgtggagctggagccagggctgcgagtgaagctg
cagttctgggacacagctgggcaggagaggttcaggtctgtgactcgctcctactaccgc
aactcggccggggggatgctgctctttgacctcaccaaccgcgcatcctttgagagcatc
cggcgatggcaccaggaggtgactgacacgatccagcccttccgcatggtcttcctgctg
gtggggcacaagagtgacctggctgggcagcgccaggtgggccagagggaggcagggaag
ttggcggcctcgctgggtgtccagtacgtggagacctcagccaaggatgcctccaatgtg
gtccaggccttccagatgctgacagtggccatttaccaagcgctgcagacggggcggttg
gtggccactgaggcatgggacggggtgaagagcagcgtcccactgccggtgctgcccaag
gctcaggggctggagaaggaggagaagcagaagagatgcttgtgctag
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