Candidatus Accumulibacter cognatus: HWD57_02955
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Entry
HWD57_02955 CDS
T10916
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
acog Candidatus Accumulibacter cognatus
Brite
KEGG Orthology (KO) [BR:
acog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acog03021
]
HWD57_02955 (rpoH)
Transcription machinery [BR:
acog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWD57_02955 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_PafC
UCR_14kD
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QLH48861
UniProt:
A0A080M8V0
LinkDB
All DBs
Position
complement(660374..661234)
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AA seq
286 aa
AA seq
DB search
MTQALAFPTVSAVGSIDAYIQAVRQFPLLSEEEEFCLATRFREEEDLDAARQLILSHLRL
VIAIARGYLGYGLSHADLIQEGNIGLMKAVKRFDPKRGVRLVSFAIQWIKAEIHEYVLKN
WRMVKVATTKAQRKLFFNLRGMKANSEGLSSLQVADIAHRLSVKPDEVIEMDTRLSGHDL
ALEGDNDDEDAFAPIAYLSDHSSEPLRVLESRARTYLQNDGLQSALAALDPRSRRIVEAR
WLTDEHSATLHELAAEFGVSAERIRQIEVKAMQKMRVNLTSLAEQT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagccttggcttttcccacggtttctgctgtcggcagcattgacgcttatatc
caggcggtcaggcaatttccgctgctcagcgaggaagaggagttttgtctggctacccgc
tttcgcgaggaggaagatctcgatgcggcacggcaattgatactgtcgcatctgcgtttg
gtgattgccatcgcgcgcgggtatctcgggtacggtctgtcccacgccgacctgattcag
gagggtaatatcggcctgatgaaagcggtgaagcgtttcgacccgaagcgcggagtgcgc
ctggtttcgttcgccatccagtggatcaaggcggagattcatgagtacgtcctgaagaac
tggcggatggtcaaagtggcaacgaccaaagcgcagcggaagctgttcttcaatctgcgc
ggcatgaaagcgaatagcgagggcctcagttcgttgcaggtggcggatattgcgcatcgc
ttgtccgtcaaaccggacgaggtgatcgagatggacactcgattatcgggtcatgatctg
gcgctggaaggcgacaatgacgatgaggatgcgtttgctccgattgcctatctctccgac
cattcgagtgaaccgctccgtgtgcttgaatcccgtgcgcgtacgtacttgcagaatgat
ggactgcaaagtgcgctggccgctctcgatccacgcagccgtcgcattgtcgaggcacgt
tggctgaccgatgagcattcggccaccttgcacgaactggcggcggaattcggtgtctcc
gccgagcgaattcgccagatcgaagttaaggcaatgcagaagatgcgggtgaatctgacc
tccctggcggaacaaacctaa
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