Candidatus Accumulibacter cognatus: HWD57_05675
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Entry
HWD57_05675 CDS
T10916
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acog Candidatus Accumulibacter cognatus
Brite
KEGG Orthology (KO) [BR:
acog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acog03009
]
HWD57_05675 (rlmD)
Enzymes [BR:
acog01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HWD57_05675 (rlmD)
Ribosome biogenesis [BR:
acog03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWD57_05675 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
TRAM
Methyltransf_11
MTS
Methyltransf_12
Methyltransf_15
Methyltransf_23
Cons_hypoth95
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QLH49331
UniProt:
A0A7D5NAY5
LinkDB
All DBs
Position
complement(1236727..1238034)
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AA seq
435 aa
AA seq
DB search
MPTGIIESLDHEARGVTRLDGKTVFVEGALPGECVEYASYRRKPSYELARTLQILVSSPQ
RETPRCPHFGVCGGCSMQHLDPQAQVAAKQRLLEDNLWHLGRIKADQLYAPIYGQPWGYR
YRARLSVRLVPKKGGVLVGFHEKRSSYVADMKQCEILPSHLSAMLLPLRELIGALSIRDR
LPQIEVAIGERMTALVLRILEALDPADEALLRDFADRHAVVFYLQPQGPATAYRFYPLDG
PQLSYRLPDFAVEHAFLPTEFTQVNHAINRVLVRRALALLDPQAGERIADMFCGLGNFTL
PIARSGARVLGVEGSAELVRRATENAAANDLDGLTEYRVANLFETTPESLAALGCFDKML
IDPPREGALELIKSFDADGPRRIVYISCSPATLARDAGILVAQKHYRLRGAGVVNMFPQT
SHVESIALFERMPAS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccggaatcatcgagtcgctggaccacgaagcgcggggagtgacccgtcttgac
ggcaaaacggttttcgtcgagggcgccttgccgggtgagtgcgtcgagtatgccagttat
cgacggaaacccagctatgagctggcacgcacgctgcagatactggtctcgtcaccgcag
cgggaaacgccacgctgcccgcattttggcgtctgcggcggttgcagcatgcaacatctc
gatccacaggcgcaagtcgcggccaagcagcgcctgctcgaggacaatctctggcacctc
ggccgcatcaaggcagaccagctctacgcgccgatctacggccagccttggggctaccgc
tatcgagcccgcctttccgttcgtctggtgccgaagaaggggggagttctcgtcggcttc
cacgagaagagaagcagttacgtcgccgacatgaaacaatgcgagattttgccgtcacac
ctttcggcgatgctcttgccgctgcgcgaactgatcggcgcgctgtcgatccgggatcgc
ctgccgcagatcgaggtggccattggtgagcggatgacggcgctggtgctgcgcattctc
gaagccctcgatccggcggacgaggccctgctgcgcgacttcgccgaccgccacgcggtg
gtcttctacctgcagccgcaggggccggcgacggcttatcgcttctatccgctcgacgga
ccgcaactttcttaccggctccccgattttgcggtcgagcacgctttcttgccgaccgag
ttcacccaggtcaatcacgcgatcaatcgcgtgctggtgcggcgcgccctggccctgctt
gatccgcaagcgggtgagcggattgcggacatgttctgcgggctgggcaacttcacgctg
ccgattgcccgctccggcgcgcgcgtgctgggggtcgagggtagcgccgaactggttcgc
cgcgccaccgagaacgcagcggcgaatgacctggacggtctcaccgagtatcgcgtcgcc
aacctcttcgagaccactccggagagcctggcggcgctcggctgctttgacaaaatgctg
atcgacccgccgcgcgaaggcgctctcgaactgatcaaatcgttcgacgcggatggcccg
cggcggatcgtctacatttcctgcagtcccgccacgctggcacgcgatgcgggcattctg
gttgcccagaaacattaccggctgcgcggtgccggcgtggtcaatatgtttccgcaaact
tcgcacgtcgaatcgatcgccctcttcgagcgcatgccggcgagctga
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