Candidatus Accumulibacter cognatus: HWD57_06380
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Entry
HWD57_06380 CDS
T10916
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acog Candidatus Accumulibacter cognatus
Pathway
acog03420
Nucleotide excision repair
acog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HWD57_06380
03430 Mismatch repair
HWD57_06380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acog03400
]
HWD57_06380
Enzymes [BR:
acog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWD57_06380
DNA repair and recombination proteins [BR:
acog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWD57_06380
MMR (mismatch excision repair)
Other MMR factors
HWD57_06380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QLH49447
UniProt:
A0A7D5NA81
LinkDB
All DBs
Position
1402970..1405159
Genome browser
AA seq
729 aa
AA seq
DB search
MSDLLAHLNAPQLAAVTLPAQHALILAGAGSGKTRVLTTRIAWLISTGQVGPQGILAVTF
TNKAAKEMQSRLAAMLPINSRGMWIGTFHGLCNRLLRAHCHEAGLPAQFQILDAADQLAT
IKRLLKNLNVDDQKFPPRELMHFINAHKEQGLRAAQAEAYDAFTSRRVELYTEYEAQCRR
EGVVDFAELLLRSYELLQRNEPLCQHYQARFRHILVDEFQDTNRLQYAWLKLLAGRGSVI
PESSAACLFAVGDDDQSIYAFRGAEIGNMRDLQREFALPNVIRLEQNYRSHGNILDAANA
LIQQNRGRLGKKLWTEAGAGEPIRVFEAYSDVDEARLIIEELSELVRAGVGRHQIALLYR
SNAQSRVLEHHLFTQGIPYRVHGGLRFFDRQEIKHALAYLRLIANPDDDTAFTRVVNFPT
RGIGSRSIEALQEAAQQTNSSLYNAAASLAGKAGSAVTRFVRLIEIMRSETRDLPLPAVI
DRLIEKSGLRQHYLAEKEGQDRLENLDELINAATAFLREENGSPSDSASDGEAVPDGGPL
ASFLAHASLEAGEHQAGEGEEAVQLMTVHAAKGLEFDVVFISGLEQGLFPHENAAQERDG
LEEERRLMYVALTRARRRLYLSHAQTRLLHGQTRYCLPSSFLEELPATLLRRINRCGSQV
SARPTSSPGGQVPTAVGGLRIGQNVRHARFGAGVIVATEGSGSEARVQVNFGAAGMKWLA
LGYARLTPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgctcgcccatctcaatgcgccacagcttgctgccgtcacgctgccagcg
caacatgccctgatacttgccggtgccggcagcggcaagacgcgcgtcctgaccacgcgg
atcgcctggctgatctcgaccgggcaggtcgggccgcagggcatcctggcggtgactttc
accaacaaggcggcaaaggaaatgcagtcgcgactcgctgccatgctgccgatcaactct
cgcggcatgtggatcggcacctttcacggtctctgcaaccgcctcctgcgcgcgcactgc
cacgaggccgggctgcccgcacaattccagattctcgatgcggcggaccagttggcaacg
atcaaacgcctgctgaagaatctcaatgtcgacgaccagaagtttccgccacgcgagctg
atgcatttcatcaacgcgcacaaggaacagggcctgcgcgctgcccaggccgaagcctat
gatgcatttaccagccgccgggtcgagctgtataccgaatatgaggcgcaatgtcggcgc
gaaggggtggtcgacttcgccgaactattgctgcgctcgtacgaactgctgcaacgtaac
gagccgctctgccagcattatcaggcgcgttttcgtcatatcctggtcgatgaattccag
gataccaaccgcctccagtatgcctggctgaaactgctcgccggacggggcagcgtcatt
ccggaaagcagtgcggcctgtctcttcgcagtcggcgacgacgaccagtcgatctacgcc
ttccgcggtgccgagatcggcaatatgcgcgacctgcagcgcgagttcgcgttgccgaac
gtgattcgactcgaacagaactaccgctcgcatggcaatatcctcgatgccgccaatgcc
ctgatccagcagaatcgtggtcgactgggcaagaaactatggaccgaagccggagctggc
gagccgatccgtgttttcgaggcgtattcggatgtcgacgaagcgcgtttgatcatcgaa
gagctgtccgaactcgttcgtgcaggtgttggacgccatcagatcgccctgctgtaccgc
tccaacgcgcagtcacgcgtcctcgagcaccacttgttcacgcagggaataccctatcgc
gtgcatggcggcctgcgcttcttcgaccgacaggagatcaagcatgcgctggcttaccta
cgcctgatcgccaaccccgatgacgatacggcttttacacgggtggtcaactttccgaca
cgcgggatcggcagtcgcagcatcgaagcgttacaggaagctgcacagcagacgaattcc
agcctctacaacgcggctgcgagtctcgccggcaaggccgggagcgcagtcacccgattc
gtccgcctgatcgagataatgcgcagcgaaacccgagatcttccccttccggcagtgatc
gatcggttgatcgagaagagcggcctgcgccagcattacttggccgaaaaggaaggccag
gaccgactcgagaacctcgacgaactgatcaacgccgcaacggctttcctgcgcgaggag
aatggctctcccagcgattcagcgagtgacggcgaagcggtgccggatggtggtccactt
gcctcctttctcgcgcacgcctcgttggaggccggcgagcatcaagccggcgaaggcgaa
gaggccgtccagttgatgaccgtgcatgccgccaagggactcgaattcgatgtggtcttc
atctccggcctcgaacagggtctttttccgcacgagaacgctgcgcaagagcgcgacggc
ctggaggaggaaaggcggctgatgtacgttgccctgacgcgtgcccgccgccgcctctat
ctgagccacgcgcagacgcgcctgctgcacgggcagacgcgctactgcctgccttcgtcc
tttctcgaagaactgccggcaacgctgttgcgcaggatcaaccgctgcggcagccaggtg
tctgcccgcccgaccagcagccccggcgggcaggtgccgaccgcagtcggcggtttgcgc
atcggccagaacgtgcgccatgcccggttcggtgccggggtcatcgtggccaccgaaggg
tcgggatccgaagcacgcgtgcaggtcaattttggtgccgccggcatgaagtggctggcg
cttgggtacgcccggctgacgccggcctga
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