Candidatus Accumulibacter cognatus: HWD57_21100
Help
Entry
HWD57_21100 CDS
T10916
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
acog Candidatus Accumulibacter cognatus
Brite
KEGG Orthology (KO) [BR:
acog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acog03000
]
HWD57_21100
Transcription factors [BR:
acog03000
]
Prokaryotic type
Other transcription factors
Others
HWD57_21100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_16
NACHT
AAA_19
AAA_30
AAA_2
AAA_7
ATPase_2
AAA_33
BrxC_BrxD
AAA_14
MCM
TniB
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QLH51992
UniProt:
A0A080M4L8
LinkDB
All DBs
Position
4659254..4660843
Genome browser
AA seq
529 aa
AA seq
DB search
MKRSVVIGFLGTQLDYGGKGSARWEKWRPTVALCQQEELIVHRLELLHDARSRGLAESVQ
ADIQSISPETEVCRVEIELRDPWDFEEVYTTLHDFARAYPFDPENEDYLLHITTGTHVAQ
ICWFLLAEARYLPARLLQTSPARKKEVANTAGSYEIIDLDLSRYNKIAQRFQRERADTVS
FLKSGIATRNASFNRMIEQIERVAGRSKSPMLLIGPTGAGKSFLARRVYELKRQKQRLAG
RFIEVNCATLRGDSAMSSLFGHVKGAFTGAQNERPGLLRAADGGLLFLDEIGELGLDEQA
MLLKAIEEKRFFPFGGDQEVTSDFQLIAGTHRDLRHWVAEGHFREDLYARINLWTFDLPG
LAQRPEDIEPNLDYELERYARDHDQLVRFNVEARRRYLAFASSADAVWSGNFRELSASVT
RMATLAEAGRITEALVIEEIERLGHSWVSRRPADAVAAILGEQAEQLDLFDRCQLNAVIA
VCRQAASLSDAGRQLFAVSRLDKKTANDADRLRKYLSRFGLDWTAVNHQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagcgtcgtcatcggttttctcggtacgcaactcgattacggtggcaagggt
agcgcacgatgggagaagtggcggccgacggtcgccctctgccagcaggaggagctgatc
gttcatcgtctggagttgctgcatgatgcacgcagccgcgggctggccgagagtgtgcag
gcggacatccagtcgatatcgcccgaaaccgaagtctgccgcgtcgagatcgagctgcgc
gacccctgggatttcgaggaagtctacacgacgctgcacgacttcgcgcgcgcttacccg
ttcgaccccgagaacgaggattacctgctgcacatcacgacaggaacccatgtcgcacag
atctgctggttcctgctggccgaagcgcgctatttgccggcccgactcctgcagacctca
ccggcacgcaagaaggaggtggcgaatactgccggaagctacgagatcatcgatctggac
ctgtcgcgctacaacaagattgcgcagcgctttcagcgcgagcgcgccgacacggtgagc
ttcctgaaatccgggattgccacgcgcaacgccagtttcaaccgcatgatcgagcagatc
gaacgggtagcggggcgctcgaagtcgccaatgctgctgatcggccccaccggtgcgggc
aaatcgtttctcgcccgccgggtgtacgaactcaagcgacagaagcagcgtctggccgga
cgtttcatcgaggtgaactgcgcgaccttgcgcggcgattcggccatgtccagccttttc
ggccacgtcaagggagccttcacgggggcgcaaaatgaacgccccgggctccttcgagcg
gccgatggcggattgctgtttctagacgaaatcggcgaactcggactggacgagcaggca
atgctactcaaggcgatcgaggaaaagcgcttcttccccttcggtggcgaccaggaagta
acgagcgacttccagctcatcgccggcacccatcgcgacctgcgccattgggttgccgag
gggcatttccgcgaagacctgtatgcgcgcatcaacctgtggaccttcgacctgcccggc
ctggctcaacggcccgaggacatcgagcccaatctcgattacgagctggaacgttatgcg
cgtgaccatgatcagctcgtgcgcttcaacgtcgaagcccgccgccgctatctggccttt
gccagctcggcggacgctgtctggagcggcaatttccgtgaactctcggcatcggtcacg
cgcatggcgactctggccgaagcgggacggatcaccgaggcgctggttatcgaggagatc
gagcggcttggccacagctgggtcagccgccggccggccgatgcggtcgctgctatcctg
ggcgaacaggccgagcaactcgacctcttcgatcgctgccagcttaacgcggtgatcgct
gtttgccggcaagcggcaagcctttcggatgccggtcgacagcttttcgccgtatcccgc
ttggacaagaaaacggccaacgacgctgaccggctgcgcaaatacctgtcacgcttcggc
ctcgactggacggccgtaaatcaccaatga
DBGET
integrated database retrieval system
