Candidatus Accumulibacter cognatus: HWD57_22040
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Entry
HWD57_22040 CDS
T10916
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acog Candidatus Accumulibacter cognatus
Pathway
acog03410
Base excision repair
acog03430
Mismatch repair
acog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HWD57_22040 (recJ)
03430 Mismatch repair
HWD57_22040 (recJ)
03440 Homologous recombination
HWD57_22040 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acog03400
]
HWD57_22040 (recJ)
DNA repair and recombination proteins [BR:
acog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HWD57_22040 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HWD57_22040 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HWD57_22040 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PAP2
Orbi_VP5
Motif
Other DBs
NCBI-ProteinID:
QLH52158
UniProt:
A0A7D5SHT4
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All DBs
Position
4873454..4875163
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AA seq
569 aa
AA seq
DB search
MTRICSRSVSPRIQWQLEQQGVHPLLARIYAGRGVVLRSELDYEFTSLLSPARLTHAAEA
AVLLADCIAGQQKILIVADYDCDGATACALGVRALRAFGADVDYLVPNRFTYGYGLSPDI
VELAATKQPKLIVTVDNGIASVHGVARARQLGIATLITDHHLPGDELPAADCIVNPNLPG
CSFPSKHLAGVGVIFYVMLALRAELRERHWFSMRSEPRLAALLDLVALGTIADVVRLDHN
NRVLVSQGLKRIRQGQLTPGLRAIFRAAGRDPAQASGNDLGFMIGPRVNAAGRLADMTLG
IECLLTDDEGRALNIAQRLDALNRERREIESGMQEQALSQIAKAIPDLKENAAAAVSLFD
ADWHQGVVGIVAARIKERLHRPVFAFARGGGGEIKGSGRSIAGLHLRDALDLLSKRAPGL
LLRFGGHAMAAGVTMRESDFACFRELFAAVVDELLSPADRTRTLETDGGLEAAYFSIATA
RLLEAEVWGQGFPAPLFQDEFIVESQRILRDKHLKLRLRKGTQYLEAIQFNFDQAPGNTI
HAAYRLAINDYNGVQTPQLLIEHLDSRAG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaatctgtagccgcagcgtctcgccgcgcatccagtggcagctcgaacaacag
ggcgtacacccgctgctggcgcgcatctacgccgggcgcggcgtcgtcttgcgcagcgaa
ctcgattacgaattcacgtcgctgctgtcacccgcccggctaacgcacgccgccgaagcc
gccgtcctgctcgccgattgcatcgccggacagcagaaaattctcatcgtcgccgactac
gattgcgacggcgccaccgcctgcgcgctgggtgtccgggcactacgggctttcggcgca
gacgtcgattatctggtaccgaaccgcttcacctatggctacggactctcccccgacatc
gtcgagcttgccgcgacgaagcagccgaagctcatcgtcaccgttgacaacggcatcgcc
agcgtccacggcgttgcccgcgccaggcagctcggcattgcaacgctgatcaccgaccac
cacctgccgggcgacgaactgccagccgccgactgcatcgtcaaccccaaccttcccggc
tgcagcttcccgagcaagcatctggccggcgtcggcgtgattttctacgtgatgctggcc
ctacgtgccgaattgcgagagcgccactggttctcgatgcgcagcgagccccggctcgcc
gccctgctcgacctggtcgccctcggcacgatcgccgacgtcgtcaggctcgaccacaac
aaccgggtgctcgtcagccagggcctcaaacgcattcgccagggccagctcacccctggc
ctgcgcgccattttccgcgccgccggacgcgatccggcgcaggcctcgggcaacgacctc
ggcttcatgatcggcccgcgcgtcaatgccgccggccgcctcgccgacatgaccctggga
atcgagtgcctgctcaccgacgacgaaggacgcgcgctgaacatcgcacaacgactcgac
gcactcaaccgcgaacgccgcgagatcgaatccggcatgcaggagcaggcgctgtcccag
attgccaaggccattcccgacctgaaagagaacgccgcggcagcggtctcgctgttcgac
gccgactggcaccagggcgtcgtcggcatcgtcgccgcacgcatcaaggaaaggctgcac
cgtccggtattcgccttcgcgcgtggtggcggcggcgagatcaagggatcgggccgttcg
atcgccggcctgcacctgcgcgatgccctcgatctgctttccaagcgcgcacctggcctg
ctgctgcgcttcggcgggcacgccatggccgccggggtgacgatgcgcgaaagcgacttt
gcctgttttcgcgaactgttcgcagccgtcgtcgatgagttgctgtcgcccgccgaccgc
acgcgcaccctggaaaccgacggcggcctcgaagccgcctatttctcgatcgccacggcg
cggctgctcgaggccgaagtctggggccaaggctttccggcgccgctgttccaggatgaa
ttcatcgtcgagagtcagcgcatcctcagggacaaacacctcaagctgcgcctgcgcaag
ggaacacaataccttgaagcgatccagttcaacttcgaccaggcacctggcaacaccatc
cacgccgcttaccggctggcgatcaacgactacaacggcgtccagacgccgcaattgctg
atcgaacatctggactcccgtgccggctga
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