Acinetobacter colistiniresistens: NQU59_01870
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Entry
NQU59_01870 CDS
T09040
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acoi
Acinetobacter colistiniresistens
Pathway
acoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQU59_01870 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoi03021
]
NQU59_01870 (rpoC)
03400 DNA repair and recombination proteins [BR:
acoi03400
]
NQU59_01870 (rpoC)
Enzymes [BR:
acoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQU59_01870 (rpoC)
Transcription machinery [BR:
acoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQU59_01870 (rpoC)
DNA repair and recombination proteins [BR:
acoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQU59_01870 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
UUM27925
LinkDB
All DBs
Position
complement(395409..399602)
Genome browser
AA seq
1397 aa
AA seq
DB search
MKDLLDIMRKKTDSEGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG
LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW
FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLTDEEYYNALEEHGDE
FTAKMGAEAVQDLLKDIDLEAEIARLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPE
WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE
KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI
TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV
IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE
AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR
ALATGKVAIHARVKVRVHQTVIDENGNREKQTIIVDTTPGRCLLWEVVPQGLSFESINLE
MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKHTIID
KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK
QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVAQDLVITESDCGTAGGLVMTPFIQGGDVIEPL
RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC
ARCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK
GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADDLGRERERYKLPYGASILLKDGEAVEAGG
IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR
PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQETSRTRDITGGLPRVADL
FEARKPKEHAILAEVSGVVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV
NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVVVRQMLRKV
DITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS
FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEFELHND
FSEVDQAFSQALNSDQF
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgctcgatatcatgcgtaagaaaacggattcagaaggtcatgcacccgtt
gaatttgaccgtatccgtattggtcttgcgtcaccagagatgattaagtcatggtctcac
ggtgaagttaaaaagcctgaaaccattaactaccgtacttttaaacctgaacgtgacggt
ttgttctgtgccaaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatac
aagcgtatgaaatacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacgactgcg
aaagttcgtcgtgaacgtatgggtcacatcgagcttgcttctccagttgcacacatctgg
ttcttgaaatcattaccgagccgtatcggtttacttcttgatatgacattacgtgatatc
gagcgcgtattgtatttcgaatcttatgtagttactgatcctggtatgactccgtttgaa
aagtatcagcttttaacagacgaagaatactacaatgcacttgaagaacacggtgatgaa
ttcactgcgaaaatgggtgcagaagcagttcaggatttattaaaagatatcgatcttgaa
gctgagattgcacgtttacgtgaagaaattccacaaacaacctctgagacgaaacttaaa
aaagcgtctaagcgtttgaagttgatggaagctttcaaagattcgaacaacaagcctgaa
tggatggtgatgaatgtactgccagtacttccaccagacttacgtccgctagtaccactt
gaaggtggtcgtttcgcgacttcagacttgaacgatttatatcgtcgtgtgatcaaccgt
aacaaccgtttgaagcgtcttcttgaccttgctgcgccagacatcatcgtacgtaacgaa
aaacgtatgttgcaagagtctgtggatgcattgcttgataacggtcgtcgtggtcgtgcg
attacaggttcgaacaaacgtccattgaaatctttggcagatatgatcaaaggtaaacaa
ggtcgtttccgtcaaaacttgctcggtaaacgtgttgactattcaggtcgttcggtaatt
accgttggtcctactttacgtcttcaccaatgtggtcttccgaagaaaatggcacttgaa
ttgttcaagccattcattttcgcgaaactacaagcctctggccaagcaacaaccattaaa
gctgcgaagaaaatggttgagcgcgagaccccggaagtttgggacgttcttgcttctgtg
attcgtcaacatccagtcatgttgaaccgtgcgccaacacttcaccgtttaggtcttcaa
gcatttgaacctattctgatcgaaggtaaggcaatccgtcttcacccactcgtctgtgct
gcgtttaacgccgacttcgatggtgaccaaatggcggtacacgttccattgacattggaa
gcacagcttgaagcacgtgcgttgatgatgtcgaccaacaacatcttgtcacctgcaaac
ggtgagccgatcattgttccttctcaggacgtggtcttgggtctttactacatcacccgt
gatgcggtaaatgccaaaggtgaaggcatggtgtttgcggacactcacgaagttaaccgt
gcgttagcgacaggtaaagttgcaatccatgcacgcgtaaaagtacgtgtacaccagact
gtgattgatgaaaacggtaaccgtgaaaagcaaaccatcattgttgatacaacacctggt
cgttgcttgttatgggaagttgttccacaaggtttaagcttcgaatcgatcaaccttgag
atgaccaagaaaaacatctcgaagttaatcaactcttgctaccgtaaacttggtttgaaa
gataccgttatcttcgctgaccaattgatgtatttgggcttccgtcaagcgacgcgttca
ggtgtatctgttggtatggaagacatgttgattccaccaactaagcatacgattatcgat
aaagctgaaacagaagttcgtgaaatcgaacaacagtttgagcaaggtttcgtaactgcg
ggtgagcgttataacaaagttgtcgatatttgggcgcgtaccaacgaccaagttgcaaaa
gcgatgatggataacttgtcttatacccttgtgaaaaataaacaaggtgaagacgagaag
cagaaatcattcaactcgatttacatgatgtctgactcgggtgcccgtggtagtgcggcg
cagatccgtcagcttgctggtatgcgtggtttgatggcgaagccggatggctcgatcatt
gagaccccaattaaagcaaacttccgtgaaggtttgacggtacttcagtacttcatctcg
acacacggtgcgcgtaaaggtttggccgataccgcattgaaaactgcgaactctggttac
ttgacacgtcgtcttgtagacgtagcacaagatttagtcattactgagtctgactgtggt
acagctggcggcttggtcatgactccattcattcaaggtggtgacgtaatcgaaccatta
cgcgatcgcgtattgggtcgtgtaactgctgaagatgtacgtcgtgcatctgatgatgaa
gtcgttcttccacgtggtaccttaattgacgagaaaatcgctgctcagcttgaagaagcg
ggtgtcgatgaagttaaagtacgttcagtgattgcatgtgaatctacattcggtgtgtgt
gcgcgttgttacggtcgtgaccttgcacgtggtcatttggtgaacccaggtgaatctgtc
ggtgtaatggctgcacaatcaattggtgaaccaggtacccagttaacaatgcgtaccttc
cacgtcggtggtgctgcgagccgaacgtctgctgcaaacagtgttcaagtgcgtaacaaa
ggtactgtacgtttccacaacgtgaaaactgtacaacatgccaaaggtcacttggtttct
gtttcacgttcaggtgaaatcggtattgcagatgacttaggtcgtgagcgtgagcgttat
aaacttccttacggtgcaagcatcttgttgaaagatggtgaagctgtagaagctggcggt
atcgtagcgacttgggatccgcatacacatccattggtaacagaagttgctggtaaagcg
cgtttcagccagatcgctgatggcgtaactgcaacatcgaaaactgatgatgcaacaggt
atgactactgttgaaatcttgcctgtaacagcacgtcctgcttctggtaaagatttacgt
cctgcaatcgtgttggatacaaccgatggcggcgaacagttctacttcttgccacaaaac
acaattgtgactgtccgtgatggcgaaacgattggtgtgggtgacgtcattggtcgtgta
ccacaagaaacttcacgtactcgtgatattaccggtggtcttccgcgtgtagctgacttg
ttcgaagcacgtaagccgaaagaacatgcgatccttgcagaagtatcaggtgttgtaagc
ttcggtaaagagaccaaaggtaagaaccgtttagtcatcactccagatgacggttcagaa
atctacgaagaattgattccaaaatggcgtcaaatcaacgtgttcgaaggtgagcatgtc
aaccgtggtgaaaccatttctgatggtccacaaaacccacatgacatcttacgcttgaaa
ggcgaagtggcattgaccaactacatcgtgaacgaagttcaagacgtttaccgtctccaa
ggtgtaaaaatcaatgataagcacattgaagttgttgtacgtcaaatgttgcgtaaagtt
gatatcactgatggcggcgatacaagcttcatcaagggcgagcaagtggattacatccgc
gttgttcaagagaaccaagcagtcttggctcagaacaagttccctgcgaagtttgaacgt
caattgatgggtattaccaaagcgtcgctttctactgactcgttcatctctgctgcatcg
ttccaggaaaccacacgtgtgttaactgaagcggctgtaacaggtaaagaagatgactta
cgtggcttgaaagaaaacgttgttgtgggtcgtttgatcccggcaggtacaggtcttgcg
tatcatttagagcgtcgtcgtcaagaagcagaagctgctgaatttgaacttcacaatgac
tttagtgaagttgatcaagcattcagtcaagcgttgaactcagaccagttctaa
DBGET
integrated database retrieval system
