Acinetobacter colistiniresistens: NQU59_05795
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Entry
NQU59_05795 CDS
T09040
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
acoi
Acinetobacter colistiniresistens
Pathway
acoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQU59_05795 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoi03019
]
NQU59_05795 (rnr)
03016 Transfer RNA biogenesis [BR:
acoi03016
]
NQU59_05795 (rnr)
Enzymes [BR:
acoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NQU59_05795 (rnr)
Messenger RNA biogenesis [BR:
acoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NQU59_05795 (rnr)
Transfer RNA biogenesis [BR:
acoi03016
]
Prokaryotic type
tRNA degradation factors
NQU59_05795 (rnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UUM28615
LinkDB
All DBs
Position
complement(1195992..1198427)
Genome browser
AA seq
811 aa
AA seq
DB search
MTKNWADPEAKAEAQRYDNPIPSRTLILTTLEQLKTAQSHAELVDHFNIPDQKSIDALNH
RLSAMVRDGQLMKDGFKYQPATDLPSHEATVYINSKGLGTANIAGQNDVLLPERELRLVF
NGDRVKVRQTSVDRKGKAWGFITEVVQRRVKQIIGKVSEHEGEYFIQPSNPNQHQPITLE
KELIQHANAKVGDMLRVAIDDYPTREELATGHIVQSMSDKADTEIIIPQTILEFGLPYEF
PEAVIKEAESFKEPSAKDLKGRVDLRDLPLVTIDGEDARDFDDAVFAEKRAGGGYRVVVA
IADVSHYVRLDSPLNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLK
LSRAGKVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPEDKTIHKSLNTLFQLYQTLK
ELRAKRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEYSLEHD
IPMLYRVHEAPEFSRIQKVRDFVKLLGLPFPEQPTQADYQAVIEATKDRLDAPSIHAVLL
RSMMQAYYGANNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAYLAKKPYPLSGAALDD
AGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFVGIISAVTEFGLFVTLKDLYVDGM
IHVSQLGEDFFLYDQASQSLIGQNRGQSFSLGDEVKIQVAGVNLEERKIDFQLVQQLTHL
GRVIRQKAPRTANPSSSNRTSTTEEVFGKPASTKSKVSEDGEKPVRKKKDKNKPSSYSKK
PAKKASAKPEIKEKAKKKVKKKKSNAKTKAE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaattgggccgatcccgaagcaaaagcagaagcgcaacgttacgataatcct
attcctagccgaactcttattttaactacattagaacaactaaaaactgcacagtctcat
gcagagcttgtcgaccactttaatatccccgatcaaaaaagtatcgatgccttgaatcat
cgtttaagtgcgatggtccgtgacggacaattgatgaaggatggatttaaataccagcct
gcaaccgatttaccaagccacgaagcaacggtctatattaatagtaaaggtttggggact
gccaacattgcgggacagaatgatgtactgctgcctgaacgtgagttacgtctggtcttt
aatggcgatcgcgttaaggtccgtcagacctcagttgaccgtaaaggtaaagcatggggc
tttattaccgaagtggtgcaacgtcgcgtcaaacaaattattggtaaagtgtctgagcat
gaaggtgaatactttattcaaccaagtaatccgaatcagcatcaaccgattacccttgaa
aaagaattgattcaacacgccaatgccaaagtgggtgatatgctgcgtgtcgcgattgat
gactacccgacccgtgaagagctggcgacaggtcacattgttcaatcgatgtcagataaa
gccgataccgagattattattccgcaaaccattctagagtttggtctaccttatgaattc
ccggaagcggtgattaaagaagcagagagttttaaagaaccttcggcaaaagatcttaaa
ggtcgtgttgatttacgagatctaccactggtcaccattgatggcgaagatgcacgcgac
tttgacgatgccgtttttgcagaaaaacgtgcaggtggtggttaccgagttgtggttgcg
attgcagatgtcagtcactatgttcgtttagactcacctttaaatgaagaagctgaagaa
cgtggaacctctgtttatttcccacatttcgtgctgccgatgctgccagaagcattatcc
aatggcctctgttctttaaatccacatgttgaccgtttatgtatggtctgcgatttaaaa
ctgtctcgtgcaggtaaagtgacaggttatgagttctaccctgcagtaatgcattccaaa
gcccgtttgacctatacccaagttggtcaatattttgaaggggcaacagatgcgattcct
gaagacaagaccatccataaatcactgaataccttattccagctctatcaaacattgaaa
gagttacgggcgaaacgtcatgcaatggaatttgaaaccattgaaacctacatgaccttt
gatgagttgggcgggatcaaagaaatcttgccacgtactcgtaatgatgcgcataaactg
attgaagaatgcatgttgttggccaatgttgccgcagctgaatactcgttagaacatgat
attccgatgttgtatcgtgtgcatgaagcacctgaattctcacgtattcaaaaagtacgt
gattttgtcaaattactcggtttgccattcccagaacaacccactcaagctgattatcaa
gcggtgattgaagcgaccaaagatcgtttagatgcgccaagtatccatgcggtgctgtta
cgttcaatgatgcaagcctattatggtgcaaacaatgccggacattacggtcttgcttat
gaagcctatacgcatttcacttcaccaattcgtcgttacccagatttattgttacaccgt
gccattaaagcctatctcgctaagaaaccttacccattgtcaggtgctgctttagatgat
gcgggcgagcatttctcacaaactgaacgtcgtgccgatgaagcttcacgcagcgtgacg
acttggttgaagtgccattatatgcaacagcatttaggtgatgagtttgttggtatcatt
agtgcggtgacagaatttggtctattcgtaacgctcaaagatctgtatgtcgatggcatg
attcatgtcagccagctcggtgaagactttttcctttatgatcaagccagccaaagtttg
attggtcagaatcgtggacagtcattcagccttggcgatgaagtgaagatccaagtagca
ggcgtaaatctggaagaacgtaagattgactttcagttggttcagcaattaacgcattta
ggccgtgtaattcgccagaaagcccctcgtactgcgaatccttctagctcaaatcgtact
tcaacaactgaagaagtctttggcaaaccggcatctacgaagtctaaagtcagtgaagat
ggtgagaagcctgtacgtaagaaaaaggataagaacaaaccaagctcttatagcaaaaag
ccagctaaaaaagcgtctgctaaaccagaaatcaaagaaaaggccaaaaagaaagtgaaa
aagaaaaagtcgaacgcgaaaacaaaggctgaataa
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