Acinetobacter colistiniresistens: NQU59_10960
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Entry
NQU59_10960 CDS
T09040
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acoi
Acinetobacter colistiniresistens
Pathway
acoi03030
DNA replication
acoi03430
Mismatch repair
acoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQU59_10960 (dnaE)
03430 Mismatch repair
NQU59_10960 (dnaE)
03440 Homologous recombination
NQU59_10960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acoi03032
]
NQU59_10960 (dnaE)
03400 DNA repair and recombination proteins [BR:
acoi03400
]
NQU59_10960 (dnaE)
Enzymes [BR:
acoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQU59_10960 (dnaE)
DNA replication proteins [BR:
acoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQU59_10960 (dnaE)
DNA repair and recombination proteins [BR:
acoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQU59_10960 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UUM26233
LinkDB
All DBs
Position
complement(2301155..2304718)
Genome browser
AA seq
1187 aa
AA seq
DB search
MRFVHLGIHTEFSITESIVRIPDLVKAAVKDEMPALALTDLSNLHAAVKFYEACLKKGIK
PILGSVIRLNDAEHRATLLAMSSTGWLNLTEIVSRGFIEGQQLSIPCVQKEWILEQSDDL
IVLLGQHSDVGKMLCSSNPQKAEPLLEAWIEKFGNRVYLALTRTERVGEEDFIQQAVKLA
AKYQIGVVAHNDVHFVEQDDFEAHEARVCIADGYVLGDDKRPKNYSTEQYFKTGEQMSEL
FSDIPSAIENTYQIAKRCNVALKLGTYFLPDFPIPDGYTIDTYFEHLSREGLEERLNHLY
PIAERDDDWAEIRKPYDERIKYEVDIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIEYVAQNYGRQ
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLATAIDMEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPGKITDYSAVLCDADGTNRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAVQNINKRIKSETPLNIANVPLDDRDAYLVFA
EANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVLSS
EMQNTDSIVFLIDDCRNNKLEVLPPSVNMSLYHFHASDEATIVYGLGAIKGVGEQAMQSV
IDSRINEGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKSFIPAKLNELTPTRRGVTTVFAGLVVDIANFPNRIMITLDDGTARVEISCNHERFQRY
KDIVRLEQVVVIEGEIYEREGFDRPMARLSKAFSLNEIRQKRAQSVQVRLSQDLMTKSLA
KDLQAILLPYCNVDMCQHIALQIQLEQSFATAELHLGPQWKVAPLDELLSKLRDYFGKEA
IFIEYQVKSKAAKVAEMPKVATIAPPPDNMSMDEALDLYQAEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttgttcatctcggtatccatacagaattttcgattacagagtcgattgttcgc
atacctgatttggtcaaagctgccgtaaaagatgaaatgccagcactggcacttaccgac
ttatccaacctgcatgcagcagtcaaattttatgaagcttgtctaaaaaaaggcatcaag
cctattttaggcagtgtcattcgactcaatgatgccgaacaccgtgcaacattactcgca
atgagcagtacgggctggcttaatcttactgaaattgtgtcccgaggatttatcgaaggc
caacaactcagcattccttgtgtacaaaaagaatggatacttgagcaatccgatgacctg
attgtcctacttggacaacatagtgatgttgggaaaatgctctgttcttccaacccacaa
aaagcagaacctttattagaagcatggattgaaaaatttggcaatcgggtgtatctcgct
ttaacccgtacagaacgtgtcggtgaagaagattttattcagcaagcggtaaagctcgca
gccaaatatcaaattggtgtggttgctcataacgatgtgcactttgttgaacaagatgat
tttgaagcacatgaagcccgtgtttgtatcgcagatggctatgttctaggggacgataaa
cgcccaaaaaactacagtactgaacaatattttaaaacgggcgaacaaatgtctgagcta
ttctcagatattcctagtgccatcgaaaacacttaccagatcgcaaaacgttgtaatgtt
gccttaaagctcgggacttatttcctacctgatttcccaattccagatggttataccatc
gacacctattttgaacatttatctcgtgaagggctagaggaacgcttaaatcatctttac
cctattgctgaacgtgatgatgattgggcagaaattcgcaaaccttatgatgaacggatt
aaatacgaagtcgatatcatcctcaagatgggattccctggttactttctgatcgttatg
gacttcattcaatgggccaaaaataatggcgtgcctgtgggtcctggtcgtggttcaggt
gcgggttcactggttgcgtatagcttaaaaattaccgatcttgacccattgcgttatgat
ctgctctttgaacgtttcttaaacccggaacgtgtctcgatgcccgactttgacgtcgac
ttctgtattgcaggtcgtgaccgcgtgattgaatacgtggcacaaaattatgggcgccaa
gcggtatcacagattgccaccttcggtacgatggcagcgaaaggtgcaattcgagatgta
gcccgtgtcttgggtaaatcctatggtcttgctgatcgtatttctaaaatggttccaacc
aaaccactcggcgtggatttggcaactgcaattgacatggaaccccaactcaaagatatc
gtcaccaacccatccaaccctgataatgatgatgccgcagaaatctgggaaatggcactc
aaattggaaggtattacccgtaatacaggtaaacatgcaggtggtgtggtaattgcacca
ggcaaaattaccgattactccgcagtattatgtgatgctgatggtaccaaccgcgttgcg
caatacgataaagatgacgttgaagcagccggtctggttaaatttgacttcttgggtctg
cgtaacctgaccgtaatcgaagatgcagttcagaatattaataaaagaatcaaatctgaa
acaccgctcaatattgccaatgtcccattagacgatagagatgcttatctggtctttgct
gaagcaaataccactgctgtattccagtttgaatccgtcggcatgaaaaaaatgctcaag
gaagcaagaccaagtaaattcgaagaaattattgccttcgtttccttgtatcgtccgggc
ccaatggatcttattcctgactttattcaccgtatgcatggtggtgagtttgaatatcta
catccattgctggaaggtgtattagaaccgacttacgggattatggtttaccaagaacag
gtcatgcaggccgcccagttctgtgcgggttatacactcggtggtgcggacttacttcgc
cgtgccatgggtaaaaagaaacctgaagaaatggtcaaacagcgccaaatctttattgaa
ggtgctgcgaaaaaagatattgatgaggccacagccaaccatatcttcgactatatggaa
aaattcgcaggctatggttttaacaaatcacacgctgctgcctatgccttggttgcttac
catacggcatggttaaaagcacattaccctgctgaattcatggccgccgttttatcttcg
gaaatgcagaacactgacagtatcgtgttcctgattgacgactgccgtaataacaagctg
gaagtgctaccgccttcggtcaatatgtctttgtaccatttccatgccagcgatgaagca
accattgtgtatggtctaggtgcaattaaaggcgttggtgagcaagcgatgcaatcggtc
atcgactcacgcattaatgaaggcccatacaaggatttattcgacttctgtcatcgtatt
gatttgaaaaaaatcaataaacgtactttagaagccctgatccgtgcgggtgcgctggat
tgtctcggtattgaacgttcgagcttaatggcacaattaccagaagccgtacaagcagcc
gaacaagcccgcagtaaccgtgaaacgggaattatggatttgtttggcgaggttgaagaa
gttcaacgtaaaccagcaaaaccagtcaaaccatggtcggatgaagttcgcctcaaaggt
gaaaaagatacccttggcctgtatcttacaggtcatcctattgatgtatatcgtcctgag
ttaaaatcatttatccctgcgaaattaaatgaacttaccccaacccgccgaggcgtcacc
accgtttttgccggtttagtcgtggatattgccaacttcccaaaccgtatcatgatcacg
ctagatgatggtaccgcccgggttgaaatcagttgtaatcatgaacgcttccagcgttat
aaagatattgttcgcttagagcaagtcgtggtgatcgaaggtgaaatttatgagcgcgaa
ggttttgaccgcccaatggctcgcctaagtaaagcttttagtttaaatgaaattcgtcaa
aaacgggctcaaagcgttcaggttcgcctttctcaagatttaatgaccaaatctttagcc
aaagatttacaggcaattctactgccttattgtaatgttgatatgtgccaacatattgcg
ctacaaatccagcttgagcaaagttttgctacagcagagcttcatctcggcccacagtgg
aaagtcgcgcctttagatgaactgctaagcaaattacgtgattattttggtaaagaagcg
atttttatcgaataccaagtaaaatccaaagcagcaaaagtcgcagaaatgccaaaagtc
gcgacgatcgcaccaccaccggacaatatgtccatggatgaagcacttgatctttatcaa
gctgaagtctctcaatattcttaa
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