Acinetobacter colistiniresistens: NQU59_13920
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Entry
NQU59_13920 CDS
T09040
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
acoi
Acinetobacter colistiniresistens
Pathway
acoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQU59_13920 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acoi03019
]
NQU59_13920 (rhlB)
Enzymes [BR:
acoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQU59_13920 (rhlB)
Messenger RNA biogenesis [BR:
acoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQU59_13920 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
FACT-Spt16_Nlob
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UUM26775
LinkDB
All DBs
Position
complement(2896278..2897429)
Genome browser
AA seq
383 aa
AA seq
DB search
MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPVKEQRFRGEPRALILAPTRELALQIESDAQALTKFSNLHLVTLLGGVDFEK
QKKMLDRNFVDIIVATPGRLIDFVEQKEVWLDKIEFLVIDEADRLLDMGFIPSVKRIVRY
SPFKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYK
LLQEILREEPIDKVMIFANRRDQVRRLYDHLKRDGYKVGMLSGEIAQDKRLKMLDQFKQG
KNNIMIATDVAGRGIHVDGVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLEGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctggttttgaaaccttaaatttacatccgcagttgaagaaagcgattgatgct
ttgggttttacacaaatgaccccaattcaacaaaaggttttaaaatatacattggcaggg
catgatgccattggtcgagcgcaaacaggtacaggtaaaactgcggcctttttgattagt
gtgatcaatgatctacttaataatccagtgaaagaacaacgtttccgtggtgaaccacgt
gcgttaattctagcgccaacacgtgagttagcattacagattgaaagtgatgcacaagca
ttaacgaaattttcaaatttgcacctcgtaacgctgttgggtggtgtggattttgaaaaa
caaaagaaaatgttggatcgaaacttcgttgatattatcgtggcaacgccagggcgtttg
atcgattttgttgaacaaaaagaagtgtggttagacaaaattgaattcttggtgatcgat
gaagcagaccgtttacttgatatgggcttcattccatctgttaaaagaattgttcgttat
tcaccatttaaagagcagcgtcaaaccttaatgttctctgcaacatttagctatgatgtt
ttgaatcttgcacgtcaatggttatttgagcctgtaacggtagaaattgaacctgaacaa
aaaacaaataacgatgttgaacaacgtgtttatgtggttgcgaagcaggataaatataag
ctgttacaagagattcttcgtgaagagccaattgataaggtgatgatttttgcgaatcgc
cgtgatcaggttcgtcgtttatatgatcatttaaagcgtgatggttataaggtcgggatg
ttatctggtgaaattgcacaagataaacgcctgaaaatgctcgatcagttcaagcaaggt
aagaataatattatgattgcaaccgatgttgcaggtcgtggtatccatgtcgatggggtt
tcgcacgtgatcaatttcaccttacctgagcaatcagatgattatgtacatcgtattggc
cgtacgggtcgtgcgggagcgcaaggtgtcagtatcagtttcctgtctgaagatgatgca
ttctatttacctgagattgaaaaagcgattggtaaaaaattaccattaacgcgtttagaa
ggttattgctaa
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