Acinetobacter colistiniresistens: NQU59_14010
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Entry
NQU59_14010 CDS
T09040
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acoi
Acinetobacter colistiniresistens
Brite
KEGG Orthology (KO) [BR:
acoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acoi03016
]
NQU59_14010
Enzymes [BR:
acoi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
NQU59_14010
Transfer RNA biogenesis [BR:
acoi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
NQU59_14010
Prokaryotic type
tRNA splicing ligases
NQU59_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
OrtA
DUF4514
Motif
Other DBs
NCBI-ProteinID:
UUM26792
LinkDB
All DBs
Position
2909133..2910404
Genome browser
AA seq
423 aa
AA seq
DB search
MSVVEQLNQQAQFEQEQQQRAYQVLQNGKSMPVKMWTNGVLVDDNSKQQLLQTAQMPFIY
KWMAVMPDVHFGLGATIGSVIPTKGAIIPAAVGVDIGCGMMATRTSLTASDLPDNLYALR
TELERLIPHGMTKGRGRDKGSWETPPEMVDQAWADLVADFDFICAKHPRLKNTNNRKQLG
TLGTGNHFVEICLDEHDHVWIMLHSGSRGVGNAIGNHFIELARKDMQKHFINLPNKDLAY
LVEGTEHFDDYWFAVGWAQRFAMKNREIMMQSAIKALATIIPKPFQARLEAVNCHHNYVE
KEEHYGEEVMVTRKGAVRARLGEYGIIPGSMGAKSFIVRGLGNQESFCSCSHGAGRVMSR
AEAKRRFTVEDQIAQTEGVECRKDAAVIDEIPSAYKPIEDVMKAQQDLVEVVYTLRQVVC
VKG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgttgaacaacttaaccaacaagctcaatttgaacaagaacagcaacaacgt
gcttatcaggttctacaaaatggaaaaagtatgccagtaaaaatgtggaccaatggcgta
ctggtcgatgacaactcaaaacaacaattgctgcaaaccgcacaaatgccgtttatttat
aaatggatggccgtaatgccagacgttcactttggcctaggtgcaaccatcggaagtgtg
attccaaccaaaggggcgattatccctgctgcggtcggtgtcgatatcgggtgtggaatg
atggcgacgcgtaccagcttaaccgcttctgatttacccgataacttatatgctttacgt
actgaactggaacgtctgattccacatggaatgaccaaaggccgtggtcgagataaaggt
tcttgggaaacgccacctgaaatggtagaccaagcttgggctgatttagttgcagatttt
gacttcatctgtgcaaagcatcctcgcctaaaaaataccaataaccgcaagcaactggga
actttaggaacaggaaatcactttgtagaaatctgtttggatgaacacgaccatgtttgg
attatgttgcactcaggttctcgcggtgtgggtaatgccatcggtaatcattttatcgag
ctggcacgtaaagatatgcagaagcactttattaacttacccaacaaagatttggcttat
ttagtcgaaggaactgaacattttgatgattactggtttgcagtaggttgggcacaacgc
tttgccatgaaaaaccgtgaaatcatgatgcagtctgcgattaaggccttagcaacgatt
attccgaaaccgttccaagcacgattggaagccgtgaattgccaccataattatgtggaa
aaggaagaacattatggcgaagaagttatggtaacccgtaaaggtgctgtacgtgcacgt
ttgggagaatatggaattatcccgggttcaatgggcgccaagtcctttattgttcgcggt
cttggaaatcaggaatcattttgctcatgttcacatggtgcaggccgcgtaatgagccgt
gctgaagcaaaacgacgttttactgtggaagatcagattgcgcagactgaaggcgtggaa
tgccgtaaagatgctgcggtaattgatgagattccatcggcctataaaccaattgaagat
gttatgaaagcacagcaggatttggttgaagtggtgtatacattaagacaagtagtatgt
gttaagggctaa
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