Anaerotruncus colihominis: K5I23_00475
Help
Entry
K5I23_00475 CDS
T08068
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
acol
Anaerotruncus colihominis
Brite
KEGG Orthology (KO) [BR:
acol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acol03400
]
K5I23_00475
Enzymes [BR:
acol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K5I23_00475
DNA repair and recombination proteins [BR:
acol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K5I23_00475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
nSTAND_NTPase5
DUF2838
Motif
Other DBs
NCBI-ProteinID:
UOX65752
LinkDB
All DBs
Position
complement(85912..89232)
Genome browser
AA seq
1106 aa
AA seq
DB search
MLHLIFGTAGAGKTTLLHERIADCVSGGGRAILLVPEQYSFESEKALYRRLGARGALQVE
VLSFTRLCDRIFREYGGLAGVHLEEAAKYLLMSVALGEVGGALKIYGKNAANAAFAASMC
EQISELKTAGASPEALRGAAQDLGGAFGDKLSDIALIFDAYQAVIERGYSDPDDCLARAC
KRLEGRNFFAGYDVFIDGFMAFMGAEWKLLKFVLTDSPHVWAALTCMGLWQGDGTGALAC
AAHTAARLVRAAREAGAAVAAPVLLETPRRFVPGALAWIAQAYPQETPAPYDGAPDGVQI
AACEDVYDEIEYIAGEICALVREKGYRYRDIALIGRALEPYLVPLETVFARYDIPYFADR
RVDIQVHPLVNGIFCALDAVRGRFDSEAVLALAKTCISGIDAVEAGLLENYCFTWGVSGA
AWAAPFVNHPDGMEGAFSDEQRERLSRINAARAALIGPLERLADGLRGCDGRGFARAIYS
YLEQVDAARRLRDYAEGMEEGDARRFLDLSAQVWDAVIGLLDVFGGALAGVSLPPARLTD
LLRLGVSTVDIGSLPQTIDQVIAGTADRIRPNAPRAVFVIGLNEGVFPLWSSPSGIFSAA
ERERLRTQGVDLLRTPEQTALFERYYVYFALTQASEALWLTYPLRDAAGAARTASSAVDE
VRALVGAPARGSAGGALARAAGERSAFDAMMRHWRDDTPETAVLRSYFTEQDPARIRTLE
ALGAPRAFSLEGRGAARALFGTRMRISPSRAELYYECPFSYFCRVGLRLRPRRRAEFNPI
ESGSLIHLVLEKIVKKYGGRGLAQLNGELLRSEITAIIDADLKARIANYDEMPARFKYLF
RRLVGTLQRLIERLALEFGQSAFEPAAFELPIGLDAPVQPLDLRAPDGTRVIVEGIVDRV
DVLEQDGKKYVRVVDYKSGAKTFSLSDICYGLNMQMLIYLFSICEADGAVPAGVLYMPAR
DSVIQAERNASGEEIQAQRLKRLRMNGILLEDRSVLSAMEPNLAGVFIPVKTKKDGSFDA
RSSLASLEQMGLIRREVERHLIGIAQGLADGKIGAEPVEGLSNYRPCDWCDYHAVCGHED
GDAVRRLAELDRAEAMKRMEEGMGDG
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatttgatttttgggacggccggcgccggcaagacgacgctgttgcatgaacgc
atcgccgattgcgtgtcgggcggcggcagggcgatcctgctggtgccggagcagtattcg
tttgagagcgaaaaggctctttaccggcggttgggcgctcgcggcgctttacaggtggag
gtgttaagctttacgcgcctttgcgaccggattttccgggaatacggcgggcttgcgggc
gtgcatctggaggaggccgcgaaatatcttttgatgagcgtggcgcttggcgaggtgggc
ggcgcgctcaagatctatggaaaaaatgccgcaaacgccgcatttgcggcctcaatgtgc
gagcagatcagcgaattgaaaacagctggcgcgtctcctgaggctctgcgcggcgcggcg
caggatttgggcggcgcgttcggggacaagctttcagacatcgcgcttatttttgacgcg
tatcaggcggtgatcgaacgcggctacagcgatccggacgactgtcttgcgcgcgcctgt
aagcgcctggagggacggaatttttttgccggctatgatgtgtttattgacggctttatg
gcctttatgggcgcggaatggaaacttttgaagtttgtgctgacggacagcccgcatgtc
tgggccgcgctgacctgtatgggcctttggcagggcgacgggaccggcgcgctcgcgtgc
gcggcgcatacggcggcgcgccttgtgcgcgccgcgcgggaggcgggcgcggctgtggcc
gcgcctgttttgctggaaacgccgcgccgcttcgtacccggcgcgctcgcatggattgcg
caggcgtatccgcaggagacgcctgcgccatacgacggcgcgccggatggtgtacagatt
gcggcgtgtgaggacgtatacgatgaaatcgaatatattgccggggaaatctgtgcgctt
gtccgcgagaagggatatcgctaccgcgacattgcgctgatcggacgcgctttggaaccg
taccttgtcccgctggagacggtatttgcccggtatgatattccatattttgccgaccgc
cgcgttgatatccaggtccatccgctcgtaaatggaattttctgtgcgcttgacgcggta
cgcggtcgttttgacagcgaggcggtgctcgcgcttgcaaagacatgcatttccgggatt
gacgccgtggaggcagggctgctggaaaattactgctttacctggggcgtatccggcgcg
gcgtgggccgcgccgtttgtaaatcatcccgacggaatggagggggcgttttccgacgag
cagcgcgaacgactttcacggatcaacgccgcgcgcgcggcgttgatcgggccgctggag
cggctggcggacggcctgcgcggctgcgacgggcgcggctttgcgcgcgcaatctattcc
tatttggagcaggttgacgctgcgcgccgtttgcgggactatgccgaagggatggaggag
ggggatgcgcggcgttttcttgatttaagcgcgcaggtttgggacgcggtgatcggcctg
ctcgatgtgttcggcggcgcgctcgcaggcgtttctctgccgcctgcccgtctgacagac
ctgctgcggttgggcgtgtccacggttgatatcggttcgctgccccagacaatcgaccag
gtgatcgccggtacggccgaccgtatccgcccgaacgcgccgcgcgcagtctttgttatc
gggctgaacgagggcgtgttcccgctgtggagcagtccgtccggcattttttcagccgcc
gagcgcgagcgcctgcgcacgcagggggttgatctgctgcgcacaccggagcagacggcg
ctttttgaacggtattatgtttactttgccctgacgcaggcgtccgaggcgctttggctg
acctatccgctgcgcgatgcggcgggggccgcgcgcacggcctcgtccgctgtggacgag
gtgcgcgcccttgtgggcgcgccggcgcgcggctctgccggcggcgcgctggcgcgcgcc
gccggagaacgctccgcctttgacgcaatgatgcgccattggcgcgacgatacgccggaa
acagcggtgctgcgaagttattttacggagcaggacccggcgcgcatccgcacgctggag
gcgctgggcgcgccgcgcgccttcagtctggaaggccgcggcgcggcgcgcgcgctgttc
ggtacgcgaatgcgcatctcgccgtcgcgtgctgaattgtattatgaatgcccgttttcc
tatttctgccgggtcggcctgcgtctgcgcccgcgccgccgcgcggaattcaatccaatt
gaatccggttcgctgattcatctggtgcttgaaaagattgtgaagaaatatggcggccgc
ggccttgcgcagctcaacggcgagctgctgcgcagtgagatcaccgcgatcatcgacgcg
gatttaaaggcgcgcatcgccaattacgacgagatgcccgcgcgctttaaatacctgttc
cgccgcctggtcggcacgcttcagcgtttgatcgagcggctggcgcttgagtttggccaa
agcgcgtttgaacctgcggcgtttgagcttcccattggacttgacgcaccggtgcagccg
ctcgacctgcgcgcgccggatgggacgcgtgtaatcgtcgaagggattgtcgatcgcgtc
gacgtgctcgaacaggacgggaaaaaatatgtgcgtgtcgtcgattataaatcgggcgcg
aaaacgttcagcctttccgacatctgttatggattgaatatgcagatgctgatctatctc
ttttccatctgcgaggcggacggcgccgtgccggccggcgtgctctacatgcccgcgcgc
gacagcgttatacaggcagaaaggaacgcgtccggcgaggaaattcaggcgcagcggctt
aaacggctgcggatgaacggcattctgctggaggaccgctctgtgctctcggccatggag
ccgaatctcgcgggcgtgtttattccagtcaaaacaaagaaggacggcagctttgacgca
cgcagctctctggcgtcgctggaacagatggggctgatccggcgtgaggtggaacgccat
ttgatcgggatcgcacaggggctggccgacggaaaaatcggcgcggagccggtcgaaggg
ctttccaattacaggccgtgcgactggtgcgactatcacgctgtttgcggtcatgaggac
ggcgatgcggtgcgccgtctcgcggagcttgaccgcgctgaagcgatgaaacggatggag
gaggggatgggcgatggctga
DBGET
integrated database retrieval system
