Anaerotruncus colihominis: K5I23_01150
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Entry
K5I23_01150 CDS
T08068
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acol
Anaerotruncus colihominis
Pathway
acol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5I23_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acol03019
]
K5I23_01150
03009 Ribosome biogenesis [BR:
acol03009
]
K5I23_01150
Enzymes [BR:
acol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K5I23_01150
Messenger RNA biogenesis [BR:
acol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K5I23_01150
Ribosome biogenesis [BR:
acol03009
]
Prokaryotic type
rRNA helicases
K5I23_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Helicase_C_2
UTP25_NTPase-like
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UOX65881
LinkDB
All DBs
Position
230755..232473
Genome browser
AA seq
572 aa
AA seq
DB search
MSETKFEDIGLSPELVQAVSDMNYTQATGIQAQAIPLLMQGADVIGRSSTGTGKTAAFGI
PAVERIESGLKAPQVLVLSPTRELAMQIADEMRKFAKYKPGVCVAAVYGGAPMDAQIRAL
RAANIVIGTPGRVMDHMRRHTLRLDDLRTVVLDEADEMLNMGFLDDIQTILAETPDTRQT
VLFSATMPPAILKITDKFLHDPQTVDIRTGQRTIAAVEQFFYRVPQARKMDALNLLLQYH
DPKRAVVFCNTKAMVDSLTEYLSDHGFRALGIHGDMKQAGRTQVMQSFRDGKTRILVATD
VAARGIDVENIEAVFNFDIPQEFEHYIHRIGRTGRAGRTGISHTLVCGARQVDTIRQLRR
FINADIREAPLPIGDEIVRKKREKFAARVARTLEADEYGKWGEQLDAIAAERGCDMRDIA
CALAQMIAARDKKLIPVLKIPAPGERPVRGGRRVVLRADAGRAQNVTPANFVAAIADASG
LPARAIGKIDIFEDSSLIELYENDALTVLEAMRSTRIRGLEVHFALTSEKPRYAARGGVT
CGREKPFFRPKPSQRRDRASYNDRNRRRMRDE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacaaaatttgaggacatcggcctgtcgccggagcttgtgcaggccgtcagc
gatatgaattatacgcaggccaccggtatccaggcgcaggcgatccccttgctgatgcag
ggggccgatgtaatcggccgctcgagcaccggcactggtaaaacggctgcgtttggcatc
cccgccgtagagcggatcgaaagcggactgaaagcgccgcaggtgctggtgctttcgccc
acgcgcgagcttgccatgcagattgccgacgagatgcgcaaatttgccaaatataagcct
ggcgtctgtgtcgcggctgtctatggcggagcgccgatggacgcccaaatacgcgcgctg
cgcgccgccaacattgtaatcggtacgccggggcgcgtgatggaccatatgcgccgccat
acgctgcgccttgacgatctgcgcaccgttgtccttgacgaagcggacgagatgctcaat
atgggttttctcgacgacattcagacgattctggctgaaacgcccgacacgcgtcagacc
gtcctgttttccgccaccatgccgccggcgattctgaaaatcaccgacaaattcctgcac
gatccgcagacggtcgacatccgcacgggtcagcgcaccatcgcggcggtcgagcaattt
ttctaccgcgtgccgcaggcgcgcaagatggatgcgctcaatctcctgcttcaatatcat
gatccgaaacgcgctgtcgtgttctgcaataccaaggcaatggtcgacagcctgactgaa
tatcttagcgatcacggctttcgggcgctcggcatccatggcgatatgaagcaggccggc
cgcacgcaggttatgcagagcttccgcgacggcaagacgcgcatccttgtagcgaccgac
gtggccgcgcgtgggatcgatgttgaaaacatcgaagctgtctttaattttgacatccca
caggagttcgagcattacatccaccgtatcggccgcaccggccgcgccggccggacaggc
atatcccacacgcttgtatgcggtgcgcgccaggtagatacaatccgtcagctgcgccgc
tttatcaacgcggatatccgcgaagccccgctgccaataggcgacgaaatcgtgcggaaa
aagcgcgaaaaattcgccgcgcgcgtcgcgcgcacgctcgaggcggatgaatatggcaag
tggggcgaacaacttgacgcgattgcggccgaacgcggctgcgatatgcgtgatatcgcc
tgtgcgctcgcgcagatgatcgccgcgcgcgacaaaaagctgattcccgttttgaaaatc
cccgcgcccggcgaacgtccggtgcgcggcggacgccgtgtggtgctgcgcgccgacgcg
ggacgcgcgcagaacgtaacgcccgccaattttgtcgcagctatcgccgacgcgtccggc
ctgcccgcgcgggcaatcggaaaaattgatatctttgaggacagttctctgatcgagctg
tacgaaaacgacgcgcttacagtgcttgaggccatgcgttccaccaggatacgcgggctg
gaggtgcactttgcactcacgtccgaaaagccgcgttacgccgcgcgcggaggcgttacc
tgcggccgggaaaagccgtttttccgcccaaagccgtcgcagcggcgcgaccgcgcctcc
tataatgaccgcaaccggcgccgtatgcgcgatgaatag
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