Anaerotruncus colihominis: K5I23_04960
Help
Entry
K5I23_04960 CDS
T08068
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acol
Anaerotruncus colihominis
Pathway
acol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5I23_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acol03019
]
K5I23_04960
03016 Transfer RNA biogenesis [BR:
acol03016
]
K5I23_04960
Enzymes [BR:
acol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K5I23_04960
Messenger RNA biogenesis [BR:
acol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K5I23_04960
Transfer RNA biogenesis [BR:
acol03016
]
Prokaryotic type
tRNA degradation factors
K5I23_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
SPATA25
Motif
Other DBs
NCBI-ProteinID:
UOX66584
LinkDB
All DBs
Position
complement(1018121..1020241)
Genome browser
AA seq
706 aa
AA seq
DB search
MFENYKVYEIEYGGKKMTFETGKMCCLSNASVLVRWGETVVLVNVTASAKPREGIDFFPL
SVDFEEKLYAVGKIPGSFIKRESRPSDKAILSSRLVDRPIRPLFPKDMRNDCSVVMTVMS
VDPDCLPEIAGMVGTSFALSISDIPWNGPIAGINVGLVDGEIIVSPDAAQRAKSDLNLTV
AANEDVICMIEAGANEVANDVMLDAIIKGHEEIKRMVAFIKNVQAEIGKPKFSFQSMEVP
HELFDAIRDFAIDDVKAALDTDNKNVRDERLAPVVERIHEKFDDEEKTNAAVIDEAIYKL
QKFIVRRWLLDEQKRVDGRKMDEIRPLAAEVGLLPRVHGSGMFTRGQTQVLTVATLGTIS
EAQKLDGIDDQEQKRYIHHYNFPSYSVGETRPSRGPGRREIGHGALAERALEPVIPPVEE
FPYTIRLVSEVLSSNGSTSQGSICGSTLALMDAGVPIKRPVAGISCGLITEGDRWMTMVD
IQGLEDFFGDMDFKVGGTEKGITAIQMDLKIVGLTYDIIREAFEKTYKARMYILNDIMLP
VIPAPREELSKYAPKMKSIKIHPDKIREVIGSGGKVIQKICADCNVKIDINDDGDVFVAG
TDSDGVRRALSIIETIVNDPEIGAIYKGRVTRLMNFGAFVELAPGKEGMVHISKLDMGRV
EKVEDVVAVGDEVIVKVTDIDQQGRINLSRRDALIAMEAKKNAAKQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaactacaaggtttatgaaatcgaatacggcgggaaaaagatgacgtttgag
acgggcaagatgtgctgcctgtcgaacgcttcggtgctggtgcgctggggcgaaacggtt
gtactcgtcaatgtgaccgcctcggccaagccgcgcgaaggcatcgacttcttcccgctt
tccgtcgattttgaggaaaagctttacgctgtcggcaagatccccggctcgttcatcaag
cgcgagtcgcgtccgtccgacaaggcgatcctgtcctcgcgcctcgtcgaccggccgatc
cgcccgctgttcccgaaggatatgcgcaacgactgttcggtcgtcatgaccgtcatgtcg
gtcgatcccgactgcctgccggagatcgccggcatggtcggcacttcgttcgcgctgtcg
atttccgacatcccgtggaacgggccgattgccggcatcaatgtgggccttgtcgacggc
gagatcatcgtcagcccggacgctgcccagcgcgcaaagagcgatctgaacctgactgtg
gccgctaacgaggatgtaatctgcatgatcgaggcgggcgcgaacgaggttgccaacgat
gtgatgctcgacgcgatcatcaagggccacgaggagatcaagcgcatggtcgcgttcatt
aagaacgtccaggccgaaatcggcaagcccaagttctcgttccagtcgatggaggtcccg
cacgagctgttcgacgcgatcagggattttgcaatcgacgatgttaaggccgcgctcgac
accgataacaagaacgtgcgcgatgagcgcctggcgccggttgtcgagcgcatccatgag
aagtttgacgacgaggaaaagacgaacgcagcggtaattgatgaagcgatctacaagctt
caaaagttcattgtccgccgctggctgctcgatgaacagaagcgtgtcgacggacgcaaa
atggacgagatccgcccgctggccgcggaggtcggcctgttgccgcgcgtgcacggttcc
ggtatgtttacgcgcggtcagacacaggtgttgaccgttgccacgctcggtacgatcagc
gaagcgcagaagctcgacggcatcgacgatcaggagcagaagcgttatattcatcactat
aacttcccgtcctattctgtcggcgagacgcgcccgagccgcggcccgggccgccgcgag
atcggacatggcgcgcttgcggagcgcgcgcttgagccggtaattccgccggtcgaagaa
ttcccgtatacaatccgccttgtttccgaggtgctttcctcaaacggctcgacgtcacag
ggttcgatctgcggctctacgctggcgctgatggacgcgggcgtgccgatcaagcgcccg
gtcgccggcatttcctgcggcctgattaccgagggcgaccgctggatgaccatggtcgat
atccaggggcttgaggactttttcggcgacatggacttcaaggtcggcggtactgaaaaa
ggcatcacagccatccagatggatttgaagatcgtgggcctgacgtatgatatcatccgc
gaggcgtttgaaaagacgtataaggcgcgcatgtacatcctcaacgacatcatgctgccg
gttatccccgcgccgcgcgaggaactttccaaatatgctcccaagatgaagtcgatcaag
atccatccggataagatccgcgaggtcatcggttcgggcggcaaggtcatccagaagatt
tgcgcagactgcaacgtcaagatcgatatcaacgacgacggcgatgtgtttgtcgcgggt
accgattccgacggcgtgcgccgcgcgctttcgatcattgagacgatcgtcaacgatccg
gagatcggcgcgatctataagggccgcgtcacacggctgatgaacttcggcgcgttcgtt
gagcttgcccccggcaaggagggaatggtgcatatctccaagctcgatatgggccgcgtt
gaaaaggtcgaggacgtcgtcgccgtgggcgacgaggtgatcgtcaaggtgacggatatc
gatcagcagggacgcatcaacctctcccgccgcgatgcgctcattgcgatggaagcgaag
aaaaacgctgcaaagcagtaa
DBGET
integrated database retrieval system
