Anaerotruncus colihominis: K5I23_06525
Help
Entry
K5I23_06525 CDS
T08068
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acol
Anaerotruncus colihominis
Pathway
acol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K5I23_06525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acol03019
]
K5I23_06525
03009 Ribosome biogenesis [BR:
acol03009
]
K5I23_06525
Enzymes [BR:
acol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K5I23_06525
Messenger RNA biogenesis [BR:
acol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K5I23_06525
Ribosome biogenesis [BR:
acol03009
]
Prokaryotic type
rRNA helicases
K5I23_06525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
P-loop_SecA
Utp25_C
ERCC3_RAD25_C
SMC_N
Motif
Other DBs
NCBI-ProteinID:
UOX66879
LinkDB
All DBs
Position
1319668..1320819
Genome browser
AA seq
383 aa
AA seq
DB search
MAQYSDLLLSEETLKAVERMGFTELTEIQEKAIPVMLEGREIIAKAPTGTGKTCAFGVPI
MEKIDPSALAVQAVVLCPTRELCTQIVDELRELAHFRPQVRVAAVYGGQQIDRQINALKR
GAQIVVATPGRMLDHMHRRTINLSKVSIAVLDEADEMLDMGFYKDVCKILDRLPKERQMV
MFSATISREVMDIGWLYQRDTVELTVEPVKESQPKIHQYMLESVGRQKLADLCYILEAND
FHKVMIFCNTKYSTASLSNLLRERGFNADCLNGDMRQSERNQIMARFRSGEISILVATDV
AARGIDVLDVDAVFNYEIPLENEYYLHRIGRTGRAKKEGVSYIFYGRDELPRLRPIIRYT
RSRVMELEFNESGELVEKGLFQP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtacagcgatttattgctttcggaggaaacattgaaggccgtggagcgcatg
ggctttacggagttgactgaaatacaggaaaaggcgatccctgtcatgcttgaagggcgc
gagatcattgccaaggcgccgacaggcaccggtaaaacgtgcgcgttcggcgtgccgatt
atggaaaaaatcgacccgtctgctctggctgtgcaggcggttgtgctctgcccgacgcgc
gagctttgcacgcagattgtggacgaattgcgcgagcttgcgcattttcgtccgcaggtg
cgggtcgcggcggtatacggcgggcagcagatcgacaggcagatcaacgccttaaagcgc
ggcgcgcagatcgtcgttgcaacgccgggccgaatgcttgaccacatgcaccgccgcacg
atcaacctttccaaggtgtcgatcgctgtgcttgacgaggccgacgagatgctcgacatg
ggattttataaggacgtatgcaaaatcctggatcgcctgccgaaggagcgtcagatggtc
atgttttccgcgaccatttcccgcgaggtaatggatatcggttggctttatcagcgcgac
accgtcgagctgacggtcgagccggtcaaggaaagccagccgaaaatccatcagtatatg
ctcgagagcgtcggccgccaaaagctcgccgacctgtgttacatccttgaggcgaacgat
tttcacaaggtcatgattttctgcaataccaaatattcaaccgcaagcctgagcaatttg
ctgcgtgaacgcggcttcaatgccgattgcctcaacggcgacatgcgccaatccgagcgc
aaccagattatggcccggttccgttccggcgagatcagcatccttgtcgcaaccgacgtg
gcagcgcgcggtatcgatgttctcgatgttgacgcggtctttaattacgaaatcccgctt
gaaaacgaatactatctccaccgcatcggccgcacgggccgcgccaaaaaggaaggggtg
tcctatattttctacgggcgcgacgagctgccgcgcctgcgtcccattattcgttacaca
cgctcacgcgttatggagcttgaattcaacgaatctggcgagttggtggaaaaggggttg
ttccagccgtaa
DBGET
integrated database retrieval system
