Anaerotruncus colihominis: K5I23_07960
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Entry
K5I23_07960 CDS
T08068
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acol
Anaerotruncus colihominis
Pathway
acol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K5I23_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acol03021
]
K5I23_07960
03400 DNA repair and recombination proteins [BR:
acol03400
]
K5I23_07960
Enzymes [BR:
acol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K5I23_07960
Transcription machinery [BR:
acol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K5I23_07960
DNA repair and recombination proteins [BR:
acol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K5I23_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Mak10
RAD51D_N
Mg_chelatase_C
GIPC1_GH2
Motif
Other DBs
NCBI-ProteinID:
UOX67129
LinkDB
All DBs
Position
1603157..1604116
Genome browser
AA seq
319 aa
AA seq
DB search
MVKIIEPKIETVELKSDGSYGKFVAEPLDRGFGTTLGNSLRRVLLSSLPGVAVISVKIDG
IQHEFSTIPGVKEDVTEIILNIKGLTAKLYCDEPKTVRIDAQGECEVTAGSIECDSEVEI
LDPSMHIATLDTGAKLAMEITLKKGQGYVSADRNKHTELEKAPVGTIAVDSIYTPVLKVN
YTVENTRVEQITDYDKLTLEVWTDGTISAKEAVSLAAKILNRQLNHFVDLSDEVSATEIM
DKKEDTGKDKLLEMTIEELDLSVRAFNCLKRAGVNTVADLINKSPDEMMKVRNLGKKSLE
EVIWKLQSLGFDLSKDDDN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
ttggttaagatcatagaacccaagatagaaacggtcgagctaaaatcggacggcagttac
ggcaaatttgtagcggaaccgctggacagaggattcggtaccacgcttggcaacagtctg
cgccgtgtgctgctttcttctcttcctggcgttgcagtcatttctgtcaagattgacggt
attcagcacgaattctcgacaatcccgggcgtcaaggaggatgtgacggaaatcatcctc
aacatcaaggggctgaccgcaaagctgtattgcgatgagcctaagactgtgcggatcgac
gcgcagggcgaatgcgaggttacggccggcagcatcgagtgcgattcggaggttgagatc
ctcgacccgagtatgcacatcgccacgctggatacgggcgcaaagcttgcgatggagatc
acgctcaaaaaagggcagggctatgtttcggccgaccgcaacaagcataccgagcttgag
aaagcgccggtcggcaccattgcggttgacagtatctatacgcctgtcctcaaggtgaat
tacacggttgaaaatacgcgcgttgaacagataaccgactatgataagcttacgctggaa
gtctggacggacggcacgatctccgcaaaggaggcggtcagtctggcggccaagatcctc
aatagacaactcaatcatttcgtcgatctctccgacgaggtgagtgccactgagatcatg
gacaaaaaggaagacacgggcaaggataagctccttgagatgaccattgaagagcttgac
ttatccgtccgcgcgttcaactgcctgaaacgggccggcgtcaacaccgtggcggatctc
atcaacaagtctccggacgagatgatgaaggtacgcaatctcggtaaaaagtcgctggag
gaagtcatctggaaattgcagtctctgggatttgacctttcaaaggacgacgataactaa
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