Anaerotruncus colihominis: K5I23_17030
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Entry
K5I23_17030 CDS
T08068
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acol
Anaerotruncus colihominis
Pathway
acol03410
Base excision repair
acol03430
Mismatch repair
acol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K5I23_17030 (recJ)
03430 Mismatch repair
K5I23_17030 (recJ)
03440 Homologous recombination
K5I23_17030 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acol03400
]
K5I23_17030 (recJ)
DNA repair and recombination proteins [BR:
acol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
K5I23_17030 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K5I23_17030 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K5I23_17030 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UOX65655
LinkDB
All DBs
Position
complement(3438402..3440459)
Genome browser
AA seq
685 aa
AA seq
DB search
MPIKRWNIRQADDEAARHAAKALGLPPLAVRILAGRGFDTQEAIRRFLTGDCALTDPMAL
RDMDRAVKRIRRAIAEGEKIAVYGDYDCDGILSTVVLYSYLESAGADVCYYIPHRDREGY
GLNREALQIIRDDGVRLVITVDNGITAVDEVAFAASIGIDVVVTDHHKPRDMLPQAVAVV
DPHRLDDESGCEYLAGIGVAFKLICALEGDDGDLMLEQYGDLIAVATVADIVPLIGENRT
IVRRGLESLQSTDNEGLAALIRVCGMADRQLSCENIAYGIVPRINSAGRFDCVDNAVELF
SGGCDEPETLAGDINSLNEKRRAVEDQIVRQIMNQLDAQTEELGRRIIVIHGEGWHHGVV
GIVASRMVERFGKPCIVFSVEGDVARGSARSIEGFSIIDAIDACSRLLIRYGGHNQAAGL
TVSMANLKAFKNAINDWAASHYPDMPQQTINIDCAISPRQLTVEEIAPLSMLEPFGSGNE
PPVFTIRSCVLQGIYAIGDGKHVRLRFCGDGCVFYAVYFGMTQANFPYTIGETVDLAVTV
DVNEWNGEQRVSVKVRDIHLSGIDYDKIHHSEQVYQRLVRSEPVEPPARAAAVPDREDIA
VVYRYLRTKGNLRAPDEMIYAKLQGNISCLCKVKIAIDVLDEMHLITREHSGGTKNVAVV
ANPRKVDISQSKILRGLAKPAAGRE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatcaaacgctggaatatccggcaggccgacgacgaagccgcgcggcatgcagcg
aaggcgcttggactgccgccgctggcggttcggattttggctggcagaggctttgataca
caggaagcaatcaggcggtttttgacaggggattgcgccctgaccgatccgatggcgctg
cgcgatatggacagggcggtgaagcgcatccggcgggcgattgcagaaggtgaaaaaatc
gctgtttacggagattatgattgcgacgggatactgtcgaccgtcgtgctttacagttat
cttgagtcggccggggccgacgtttgttattatattccgcatcgcgacagggaaggctac
ggcctgaaccgcgaggctttgcagatcattcgtgacgacggtgtgcggcttgtgatcacg
gttgacaatggaattacagctgtcgacgaggttgcttttgccgcctccatcggcatagac
gttgttgtcaccgaccatcataaaccgcgcgatatgctgccgcaggcagtagcagttgtc
gatccccatcgcctggacgatgaaagcggctgtgaatacctcgccggaatcggcgtggcg
ttcaagcttatttgtgcgttggagggcgacgatggtgatttgatgcttgagcagtatggc
gatctgatcgccgtagccacagttgcagatatcgtaccgctcatcggcgagaacaggacc
attgtacggcgcggtctggaaagcctgcaaagcacggataacgagggcttggccgcgctg
atccgcgtttgcggcatggcggaccggcagttgtcgtgtgaaaatattgcgtatgggatt
gtgccgcgtatcaattcagccggccggtttgactgcgtcgacaatgctgtcgagcttttt
tcgggcggctgtgacgagccggaaacactcgccggcgacatcaattcactcaatgagaag
cgccgcgcagtcgaggatcagatagtgcggcaaataatgaaccagcttgatgcgcagaca
gaggaacttggccgccgtatcattgtgatccatggcgagggctggcaccacggcgtcgtg
ggaattgtcgcttcccgtatggtggaacggttcggcaagccctgcattgttttttctgtt
gaaggggatgtggcgcgcggttccgcgcgcagcatcgaaggcttttcgattattgacgca
atcgacgcctgttcgcggcttttgatccgttatggaggccataatcaggcggccggactg
acggtatcaatggcaaatctcaaggcgtttaaaaatgcaatcaacgattgggcggcttct
cactatcccgatatgccgcagcagacaatcaacatcgactgtgctatttcgccgcgccag
ttaacagttgaggagatcgcgccgctgtctatgctggagccgtttggctcaggaaacgaa
ccgcctgtctttacaatccgcagctgtgttttgcagggaatttatgcaatcggcgacggc
aagcatgtacggctgcgtttctgtggggacggatgtgtattttatgccgtttactttggt
atgacgcaggccaattttccttatacaatcggtgaaacagtggatttggcggttacggtt
gatgtaaatgaatggaatggggagcagcgcgtttccgtcaaggtgcgcgatatccacctt
tccggaatagactatgataaaatccatcattccgaacaggtgtaccagcgtcttgtgcgc
agcgagccggtcgagccgccggcgcgggcggccgcagtgcccgatcgggaggatattgcg
gtggtataccgttatctgcgtacaaaaggaaatctgcgcgcgccggatgaaatgatctat
gcaaaattacagggcaatatttcgtgcctgtgtaaggtcaagatcgcaatcgatgtgctc
gatgaaatgcatttgatcacccgggaacacagcgggggcacaaaaaacgtcgccgttgtg
gccaatccgcgcaaggtggatatctcccaatccaagattctgcgcgggcttgcaaagccc
gccgcggggcgtgaatga
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