Parazoarcus communis: CEW83_06790
Help
Entry
CEW83_06790 CDS
T05456
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acom
Parazoarcus communis
Pathway
acom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW83_06790 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acom03019
]
CEW83_06790 (pnp)
03016 Transfer RNA biogenesis [BR:
acom03016
]
CEW83_06790 (pnp)
Enzymes [BR:
acom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CEW83_06790 (pnp)
Messenger RNA biogenesis [BR:
acom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEW83_06790 (pnp)
Transfer RNA biogenesis [BR:
acom03016
]
Prokaryotic type
tRNA degradation factors
CEW83_06790 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
KH_KhpA-B
KH_SLS1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AWI74965
UniProt:
A0A2U8GR38
LinkDB
All DBs
Position
complement(1492134..1494236)
Genome browser
AA seq
700 aa
AA seq
DB search
MPTSIKKSFAYGAHTVTLETGEIARQAGGAVIVNMDDTMVLATVVAAKEAKPGQDFFPLT
VDYVEKFYAAGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPEGFNNEVQVIALVLSL
NPEVDADIPAMIAASAALAISGVPFSGPIGAARVGYADGQYLLNPTTEQLKTSELNLVVA
GTEAAVLMVESEARELSEEVMLGAVVFGHEQMQHAIRAINELVEVAGKPEWDWKAQPANE
PLIARIEELAKADLEAAFNITSKQARSARISEILKATVAALTDGVEVPPSLNEVKDIFFN
LESGIVRSRILNGEPRIDGRDTRTVRPIEIRTGVLPRAHGSALFTRGETQALVVATLGTG
RDEQIIDAIAGEYRENFMLHYNFPPFCTGETGRFGITKRREVGHGRLAKRALIAALPKPE
DFSYTVRLVSEITESNGSSSMASVCGGSLALMDAGVPMTAHVAGIAMGLIKDGNRFAVLT
DILGDEDHLGDMDFKVAGTENGITALQMDIKIQGITKEIMKVALSQAGEGRIHILGLMKQ
SLDTARVEVSEFAPRMINIKINPEKIRDVIGKGGAVIRGLQEETGAVIEIQDDGNVTISC
VSAEGAQAAKAKIEAITAEVEVGKIYEGTVVRLLDFGAIVNIMPGRDGLLHVSQIANERV
NNVADYVKEGQAVRVKVLETDERGKIRLSMKALLEQAATN
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
ttgcctacttccatcaagaaatcattcgcctacggcgcgcacaccgtcaccctcgagacc
ggcgagattgctcgtcaggccggcggtgccgtgatcgtcaatatggacgacaccatggtg
ctggccaccgtggttgcggccaaggaagccaagcccggtcaggacttctttccgctgacc
gtcgattacgttgagaagttttacgctgccggccgtattcccggtggtttcttcaagcgt
gaaggccgtccgaccgagaaggaaaccctgacctcgcgcctgatcgaccgcccgatccgc
ccgctgtttccggaaggcttcaacaacgaagtccaggtcatcgcgctggttctgtcgctg
aaccccgaagttgacgccgacatcccggcgatgatcgctgcttcggccgcgctggcaatc
tccggcgtgcctttcagcggcccgatcggcgctgcacgcgtcggttacgccgatggtcag
tacctgctcaaccccaccaccgagcagctcaagacgagcgaactcaacctggtggtggcc
ggtaccgaagctgccgtgctgatggtcgaatccgaagcgcgcgaactgtccgaagaagtc
atgcttggtgccgtcgtgttcggtcatgagcagatgcagcacgccatccgtgcgatcaac
gaactggtcgaagtcgccggcaagccggagtgggactggaaggcgcagcccgccaacgag
cccctgattgcgcgtattgaagagctggccaaggccgacctcgaagccgctttcaacatc
accagcaagcaggcccgcagcgcccgcatcagcgagatcctgaaggcgaccgtcgccgcg
ctgaccgatggcgtcgaagtgccgccgtcgctcaacgaagtgaaggacatcttcttcaat
ctcgagtccggcatcgtccgcagccgcatcctgaatggcgagccgcgtatcgatggtcgt
gacacccgcaccgtgcgtccgatcgagatccgtaccggcgtgctgccgcgtgcccacggc
tcggccctgttcacccgcggcgaaacccaggcgctggtggttgccaccctcggcactggc
cgcgacgaacagatcatcgacgcgatcgccggcgagtaccgcgaaaacttcatgctgcac
tacaacttcccgccgttctgcaccggcgagaccggtcgtttcggcatcaccaagcgtcgc
gaagtcggccatggccggcttgccaagcgcgcactgatcgctgcgctgccgaagccggaa
gatttcagctacaccgtgcgtctggtgtcggaaattaccgaatcgaacggttcgagctcg
atggcctccgtgtgcggtggctccctggcgctgatggatgccggtgtgccgatgactgcg
cacgtggcaggtatcgccatgggcctgatcaaggacggcaaccgcttcgccgtgctgacc
gacatcctgggcgacgaggatcacctcggcgacatggacttcaaggtggccggtaccgaa
aacggtatcactgcactgcagatggacatcaagatccagggcatcaccaaggagatcatg
aaggtcgcgctgtcgcaggcaggtgagggtcgcatccacatcctcggcctgatgaagcag
tcgctcgacaccgcgcgtgtcgaagtgtccgagttcgccccgcgcatgatcaacatcaag
atcaaccccgagaagatccgcgacgtgatcggcaagggcggcgcagtgatccgcggtctg
caggaagagaccggcgccgtgatcgagatccaggacgacggcaacgtcaccatctcctgc
gtcagcgcggaaggtgcccaggcggccaaggccaagatcgaggcgatcaccgccgaagtc
gaagtcggcaagatctacgaaggtacggtcgtgcgtctgctcgacttcggtgccatcgtg
aacatcatgccgggccgcgatggtctgctgcacgtgtcgcagatcgccaacgagcgtgtg
aataacgttgccgactacgtcaaggaaggtcaggccgtccgcgtcaaggttcttgagacc
gacgagcgcggcaagatccgcctgagcatgaaggcgctgctcgagcaggccgcaacgaac
tga
DBGET
integrated database retrieval system
