Parazoarcus communis: CEW83_06990
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Entry
CEW83_06990 CDS
T05456
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acom
Parazoarcus communis
Pathway
acom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW83_06990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acom03019
]
CEW83_06990
03009 Ribosome biogenesis [BR:
acom03009
]
CEW83_06990
Enzymes [BR:
acom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CEW83_06990
Messenger RNA biogenesis [BR:
acom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEW83_06990
Ribosome biogenesis [BR:
acom03009
]
Prokaryotic type
rRNA helicases
CEW83_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AWI75002
UniProt:
A0A2U8GMY8
LinkDB
All DBs
Position
1536607..1538673
Genome browser
AA seq
688 aa
AA seq
DB search
MTEPIESFAQLGLPDNLLSALAAVGYETPSPIQAACIPHLLAGRDLLGEAQTGTGKTAAF
ALPALAMLDIADTRPQVLVLTPTRELAIQVAEAFGKYAHHLKNFHVLPVYGGQSMVVQLR
QLSRGAQVIVGTPGRVMDHLERGSLKLDALKMLILDEADEMLRMGFIDDVEWILDHTPAT
RQTALFSATMPNVIRDVARRHLREPEEIKIRSSTSTVAKIRQRYWLVRGVDKLDALTRIL
DAEETFDAAITFVRTKIATEELADKLAARGYAAAALNGDMTQGLRERVIEQLKNGALDIV
VATDVAARGIDVPRVSHVINYDIPYDTEAYVHRIGRTGRAGREGSAILFVAPRETRMLKT
IERATRQPIEPIALPSREEVSTLRVNQFKQLVLDTLSGQDLGFFMDVVNSLTEENELQAH
EIAAALAYLAQRERPLQVEESGRGWDVATTATSAGGRPPREEHFTTGAPRERTERPNRDE
ILARRRSFADGALARYRIEVGRNQGASPKEIVGAIANEGGIDGRFIGQIHLFNDFSTVEL
PANLPDDLLGVLKRTRVKQCALNIRPLTDEEALATPERPRAPRGDHAPRGDHAPRREDSP
RREHTPRRDDSFGDRRPPRPAGGEGKPAWGNKPAGGYEKPAGSYGKPGAPKPWSGAPRRD
DRGPSRSGPDRSGSAPFSAGKPKKRRED
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccatcgaatcctttgcccagctgggcctgcccgacaatctgctttcggca
ctcgccgcagtcggctatgaaacgccatccccgatccaggcagcgtgtatcccgcacctg
ctcgcaggacgtgacctgctgggcgaagcccagaccggcaccggaaaaacggccgcattc
gcactgcccgcgctggcgatgctcgacatcgccgacacccgcccgcaggtgctggtgctc
accccgacacgcgagcttgccatccaggtggccgaagcctttggcaaatacgctcatcac
ctgaagaatttccacgtcctgcccgtttatggtgggcagagcatggtggtgcagctgcgc
cagctgtcgcgcggcgcacaggtcatcgtcggcacgccgggccgggtcatggaccacctc
gaacgcggcagcctgaagctcgacgcgctcaagatgctgatcctcgacgaagccgacgaa
atgctgcgcatgggcttcatcgacgacgtcgaatggattctcgatcacaccccggcaacc
cggcagacggcgctgttctcggccaccatgcccaacgtgattcgtgacgtggcacgtcgc
cacctgcgcgaacccgaagaaatcaagatccgttcatcgacctccaccgttgccaagatc
cgccagcgctactggctggtgcgcggcgtggacaagctcgacgcgctgacccgcatcctc
gatgccgaggaaaccttcgacgcagccatcaccttcgtgcgcaccaagattgcgaccgaa
gagctggccgacaagctcgccgcccgcggctatgctgctgcagcgctgaacggcgacatg
acgcagggcctgcgcgaacgcgtcatcgagcaactcaagaacggcgcgctcgacatcgtc
gtggcaaccgacgtcgccgcccgcggcatcgatgtgccgcgcgtgagccacgtcatcaac
tacgacatcccctacgacaccgaagcctatgtgcaccggatcgggcgtaccggccgtgcg
ggccgcgaaggctcggcgatcctgttcgtcgcgccgcgcgaaacgcgcatgctcaagacc
atcgagcgcgccacccgccagccgatcgaacccatcgccctccccagccgcgaggaagtc
tccacgctgcgggtgaaccagttcaagcaactggttctggacaccctgagcggccaggac
ctcggtttcttcatggacgtggtcaatagcctcaccgaagaaaacgaacttcaggcacac
gagatcgccgccgcactggcttaccttgcccagcgcgaacgcccgctgcaggtcgaagag
tccggccgtggctgggacgtggcgaccaccgcgaccagcgccggcggtcgtcctccgcgc
gaagagcacttcaccaccggcgcaccgcgtgagcgcaccgagcgcccgaaccgggacgag
atcctcgcccgccgccgctcgtttgccgatggcgcgctggcgcgctaccgcatcgaagtc
ggtcgcaaccagggcgcgagccccaaggagatcgtcggcgcaatcgccaacgaaggcgga
atcgacggtcgcttcatcggccagatccacctcttcaacgatttctccacggtcgagttg
ccggccaacctgcccgacgacctgctgggcgtgctcaagcgcacccgggtcaagcagtgc
gccctcaacatccgcccgctgaccgacgaagaggcgctggccacccccgagcgtccgcgc
gcgccgcgcggcgaccatgcaccgcgtggcgaccacgcaccgcgccgcgaggacagcccg
cgccgtgagcacacgccgcgccgggacgacagcttcggcgatcgccgcccgccccgcccc
gcaggcggtgagggcaagccggcctggggcaacaagcctgccggtggctatgaaaagccc
gccggcagctatggcaagcccggtgcgccgaagccgtggagcggtgccccgcgtcgcgac
gatcgcggcccttcgcgctcgggccccgatcgctcgggctctgcgcccttctcggccggc
aagccgaaaaagcgcagggaagactga
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