KEGG   Parazoarcus communis: CEW83_09715
Entry
CEW83_09715       CDS       T05456                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
acom  Parazoarcus communis
Pathway
acom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CEW83_09715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acom03019]
    CEW83_09715
Enzymes [BR:acom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CEW83_09715
Messenger RNA biogenesis [BR:acom03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CEW83_09715
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 Utp25_C CMS1
Other DBs
NCBI-ProteinID: AWI75453
UniProt: A0A2U8GQI6
LinkDB
Position
2139104..2140585
AA seq 493 aa
MSFADLGLIPELLQAVAESGYTDPTPIQSQAIPIVLAGKDILGGAQTGTGKTAGFTLPLL
QRLARHASTSTSPARHQTRALILAPTRELAMQVYESVKTYSKHIPLRSTCIYGGVDMKAQ
VAELRRGIEIVIATPGRLLDHVQQKTIQLNQVEMLVLDEADRMLDMGFIPDIKRILELLP
ASRQSLLFSATFSDEIKKLADQMLKDPQLIEVARRNMVSETITHVVHPVSAGMKRNLLAH
LLRHQPDTQALVFVATKIVCGRLAHFLERSGISADAIHGDKGQQQRTETLEAFKAGKLRV
LVATDVAARGIDIDELPNVINFELPHTAEDYVHRIGRTGRAGHKGNAVSLVCSEEKHYLA
DIQKLIKLEIPQEIVPGFDPDPDFFEAGSRHRGRRSGGASASMPAEPRQRAPAAPRAAPA
AGESRGGRNGNTGGGNRGRQRSTVAPDGFDFSKPYESARAPEATADTGAPAEKSAPRRPQ
RPIAVLLGGLGRK
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagttttgccgacctcggcctcatcccggaactcctgcaagccgtagcagaatccggc
tacaccgaccccaccccgatccagagccaggcaatccccatcgtgcttgccggcaaagac
attctgggcggcgcccagaccggcaccggcaagaccgcaggctttaccctgcccctgctg
caacgccttgcccgccatgccagcaccagcacctcccccgcccgtcaccagacacgcgcg
ctgattctcgcgccgacccgcgaactggcgatgcaggtgtatgagtcggtcaagacctac
agcaagcacatcccgttgcgctcgacctgcatttacggtggcgtcgacatgaaggcccag
gtcgccgaactgcgccgcggcatcgaaatcgtcatcgccacgccggggcgcctgctcgac
cacgtccagcaaaagaccatccagctcaaccaggtcgaaatgctcgtgctcgacgaagcc
gaccgcatgctcgacatgggcttcatccccgacatcaagcgcattcttgagctgctgccg
gcgagccgtcagagcctgctgttctcggccaccttctccgacgagatcaagaagctcgcc
gaccagatgctgaaggacccgcagctgatcgaagtcgcgcgccgcaacatggtgtcggaa
accatcacgcacgtcgtgcacccggtctccgctggcatgaagcgcaacctgctcgcgcac
ctgctgcgtcatcagcccgacacccaggcactggtctttgttgccaccaagatcgtatgc
ggccgcctcgcccacttcctggagcgcagcggcatctccgccgatgccatccacggtgac
aaggggcagcaacagcgcaccgaaaccctggaggcgttcaaggccggcaagctgcgcgtg
ctcgtggccaccgacgttgccgcacgcggcatcgacatcgacgaactgcccaacgtcatc
aacttcgagttgccacacaccgccgaagactacgtccaccgtatcggccgcaccggccgt
gccggccacaagggcaacgcggtgtcgctggtgtgctcggaagaaaagcactatcttgcc
gacatccagaagctgatcaagctcgagattccgcaggaaatcgtgcccggcttcgacccc
gaccccgatttcttcgaagccggcagccgtcaccgtggtcggcgcagtggcggcgccagc
gcatccatgccagccgaaccacggcagagagcgccggctgcaccccgcgctgcacctgcc
gcaggcgagtcgcgcggcggccgcaatggcaacacaggcggtggaaatcgcggcaggcag
aggtccactgtcgcaccggacggcttcgatttcagcaaaccctacgaatctgcccgcgcc
cccgaagcgacggcggacaccggcgcacccgctgaaaaatccgcgccgcgccgcccgcag
cgtccgatcgcggtactgctgggcgggctggggcggaaatag

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