Parazoarcus communis: CEW83_09715
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Entry
CEW83_09715 CDS
T05456
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
acom
Parazoarcus communis
Pathway
acom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW83_09715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acom03019
]
CEW83_09715
Enzymes [BR:
acom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CEW83_09715
Messenger RNA biogenesis [BR:
acom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEW83_09715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
AWI75453
UniProt:
A0A2U8GQI6
LinkDB
All DBs
Position
2139104..2140585
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AA seq
493 aa
AA seq
DB search
MSFADLGLIPELLQAVAESGYTDPTPIQSQAIPIVLAGKDILGGAQTGTGKTAGFTLPLL
QRLARHASTSTSPARHQTRALILAPTRELAMQVYESVKTYSKHIPLRSTCIYGGVDMKAQ
VAELRRGIEIVIATPGRLLDHVQQKTIQLNQVEMLVLDEADRMLDMGFIPDIKRILELLP
ASRQSLLFSATFSDEIKKLADQMLKDPQLIEVARRNMVSETITHVVHPVSAGMKRNLLAH
LLRHQPDTQALVFVATKIVCGRLAHFLERSGISADAIHGDKGQQQRTETLEAFKAGKLRV
LVATDVAARGIDIDELPNVINFELPHTAEDYVHRIGRTGRAGHKGNAVSLVCSEEKHYLA
DIQKLIKLEIPQEIVPGFDPDPDFFEAGSRHRGRRSGGASASMPAEPRQRAPAAPRAAPA
AGESRGGRNGNTGGGNRGRQRSTVAPDGFDFSKPYESARAPEATADTGAPAEKSAPRRPQ
RPIAVLLGGLGRK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgccgacctcggcctcatcccggaactcctgcaagccgtagcagaatccggc
tacaccgaccccaccccgatccagagccaggcaatccccatcgtgcttgccggcaaagac
attctgggcggcgcccagaccggcaccggcaagaccgcaggctttaccctgcccctgctg
caacgccttgcccgccatgccagcaccagcacctcccccgcccgtcaccagacacgcgcg
ctgattctcgcgccgacccgcgaactggcgatgcaggtgtatgagtcggtcaagacctac
agcaagcacatcccgttgcgctcgacctgcatttacggtggcgtcgacatgaaggcccag
gtcgccgaactgcgccgcggcatcgaaatcgtcatcgccacgccggggcgcctgctcgac
cacgtccagcaaaagaccatccagctcaaccaggtcgaaatgctcgtgctcgacgaagcc
gaccgcatgctcgacatgggcttcatccccgacatcaagcgcattcttgagctgctgccg
gcgagccgtcagagcctgctgttctcggccaccttctccgacgagatcaagaagctcgcc
gaccagatgctgaaggacccgcagctgatcgaagtcgcgcgccgcaacatggtgtcggaa
accatcacgcacgtcgtgcacccggtctccgctggcatgaagcgcaacctgctcgcgcac
ctgctgcgtcatcagcccgacacccaggcactggtctttgttgccaccaagatcgtatgc
ggccgcctcgcccacttcctggagcgcagcggcatctccgccgatgccatccacggtgac
aaggggcagcaacagcgcaccgaaaccctggaggcgttcaaggccggcaagctgcgcgtg
ctcgtggccaccgacgttgccgcacgcggcatcgacatcgacgaactgcccaacgtcatc
aacttcgagttgccacacaccgccgaagactacgtccaccgtatcggccgcaccggccgt
gccggccacaagggcaacgcggtgtcgctggtgtgctcggaagaaaagcactatcttgcc
gacatccagaagctgatcaagctcgagattccgcaggaaatcgtgcccggcttcgacccc
gaccccgatttcttcgaagccggcagccgtcaccgtggtcggcgcagtggcggcgccagc
gcatccatgccagccgaaccacggcagagagcgccggctgcaccccgcgctgcacctgcc
gcaggcgagtcgcgcggcggccgcaatggcaacacaggcggtggaaatcgcggcaggcag
aggtccactgtcgcaccggacggcttcgatttcagcaaaccctacgaatctgcccgcgcc
cccgaagcgacggcggacaccggcgcacccgctgaaaaatccgcgccgcgccgcccgcag
cgtccgatcgcggtactgctgggcgggctggggcggaaatag
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