Parazoarcus communis: CEW83_12070
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Entry
CEW83_12070 CDS
T05456
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
acom
Parazoarcus communis
Pathway
acom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEW83_12070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acom03019
]
CEW83_12070
Enzymes [BR:
acom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CEW83_12070
Messenger RNA biogenesis [BR:
acom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CEW83_12070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
CMS1
UTP25_NTPase-like
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AWI75860
UniProt:
A0A2U8GQV1
LinkDB
All DBs
Position
2633448..2635007
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AA seq
519 aa
AA seq
DB search
MNTESNFASLGLAEPLLRAISEAGYTTPTPIQAQAIPQVLAGGDLLAAAQTGTGKTAGFT
LPVLHLLSQTHVHPHPNGRPRCLILTPTRELAAQVEESVKTYGKHLPLTSMVMFGGVNIN
PQISALKKRVDILVATPGRLLDHVNQRTLDLSGVEILILDEADRMLDMGFIRDIRKVLAL
LPKKRQNLLFSATFSDEIRELANGLLHNPGCVEVAARNTTAERVEQAAYMIGQKQKRELL
AWLIKERQWFQALVFTRTKHGANKLAEYLTKHGIESSAIHGNKSQAARTRALAQFKDGSL
PVLVATDIAARGLDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGAAGHAISLVDREELKL
LTAIERLMHRKVDRATAEGFVPSATAEQSHDEDQRREPIQRRGGGGGRNNNEQRRSSAPA
GRSDRPGGRGPANGGQPGNRGPQRARPEADGNRARPAPRQAGEVDGNRAAPSRAEPNGNH
AGNRGRSEVNGNRAPQASDRRNTAPRAALFSARTGNGNR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagaatcaaatttcgccagtctcggactggcagaacccttgctgcgcgccatt
tcggaagccggctacaccacgccgacgccgatccaggcccaggccattccgcaggtgctc
gccggtggcgacctgctcgccgcagcgcagaccggcactggcaagactgccggcttcacc
cttccggtgctgcacctgctgtcgcagacgcatgtgcatccgcaccccaacggccgaccg
cgctgcctcattctcacccccacccgcgaactggcagcccaggtcgaggaatcggtcaag
acttacggcaagcacctgccgctgacctcgatggtgatgttcggcggcgtcaacatcaat
ccgcagatctcggcgctgaagaagcgggtcgacatcctggtggccacgcccggccgcctg
ctcgatcacgtcaatcagcgcacgctggatctgtccggcgtcgagatcctgatcctggat
gaagccgaccgcatgcttgacatgggcttcatccgcgacatccgcaaggtgctcgcactg
ctgccgaagaagcgccagaacctgctgttctcggccaccttctccgacgagattcgtgag
ctggccaacggcctgctgcacaaccccggctgcgtcgaagttgctgcgcgcaacaccacc
gccgagcgcgtcgagcaggctgcctacatgatcgggcagaagcagaagcgcgaactgctg
gcgtggctgatcaaggaacgccagtggttccaggcgctcgtgttcacccgcaccaagcac
ggcgccaacaagctggccgaatacctgaccaagcacggcatcgagtcatcggcgattcac
ggcaacaagagccaggctgcacgtacccgtgcgctggcacaattcaaggacggatcgctg
ccggtcctggttgccaccgatatcgccgctcgcggtctcgacatcgatcaattgccgcag
gtggtgaacttcgaactgccgaacgtgcctgaagactacgtgcaccgcatcggccgcacc
ggccgtgccggcgctgccggccacgcgatttcgctggtcgaccgggaagagctcaagctg
ctgaccgcaatcgaacgcctgatgcaccgcaaggtcgaccgcgccacggccgaaggcttc
gtgcccagcgccacggcagagcagtcgcatgacgaagatcagcgccgcgagccgatacag
cgccgcggtggcggtggcggtcgtaacaacaacgaacagcgccgaagcagcgcgcccgcc
ggacgcagcgatcgtcccggcggccgtggtcccgcaaacggtggccagcccggcaaccgt
ggtccgcagcgcgcccgccccgaggcggacggcaatcgtgcccgtcccgcgccgcgccag
gccggtgaagtggacggcaatcgcgccgcccccagtcgcgccgaacccaacggcaaccat
gcgggcaaccgtggccgcagcgaagtgaatggcaatcgcgcgccgcaggcgtccgaccgc
cgcaataccgcaccgcgcgcagcgctgttctccgccagaacggggaacggcaatcgctga
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