Parazoarcus communis: CEW83_20235
Help
Entry
CEW83_20235 CDS
T05456
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
acom
Parazoarcus communis
Pathway
acom02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acom00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CEW83_20235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acom03021
]
CEW83_20235
Transcription machinery [BR:
acom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEW83_20235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
BUD22
Motif
Other DBs
NCBI-ProteinID:
AWI77274
UniProt:
A0A2U8GV27
LinkDB
All DBs
Position
complement(4419590..4421599)
Genome browser
AA seq
669 aa
AA seq
DB search
MAREKAKDTRKDSPKGRTAKAKAKDKLALIIESPEIAPLDAEVRRTRLKTLITLGKERGY
LTYAEISDHLPDDVADAEQIEGIIATFNNMGIQVYDAAPAAEDLLMSDNVASTVDEDVAE
EEAEQALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEDGLKHMVLAIAAC
PTTIAEMIDIADKVIREEMRIDEIVDAVIDPNAPTAEETAAAAAEAAEESADSDSDDSDD
NDNDDDSDDDSDGDSEGAANAASLLQLKTDALARFEAIRGHYEQMMKVLADKGSQDKAYL
EYQQLISEELINIRFTAKSIERLCDSVRRMVEQVRGHERHILQLCVNRAGMPRQHFIKIF
PGHETDSDWIDSELASNKNYVDALSRVHPAITEEQAKLLDLQDKIGIPLKELKDINRQMS
TGEAKMRRAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQETGAEPDPATLAEK
MEMPEDKIRKIMKISKEPISMETPIGDDDDSHLGDFIEDTATLAPAEAAMYSGLRDATGE
VLDSLTQREAKVLRMRFGIEMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEK
LRSFLDSDA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgagaaagccaaggatacgcgcaaggacagcccgaaaggtcgcactgccaag
gccaaggccaaggacaagctcgcgctgatcatcgaaagcccggaaattgcgccgcttgat
gccgaggtccgtcgcacgcgactgaagacactgattaccctcggcaaagagcgtggctat
ctcacctacgccgagatcagcgaccaccttcctgacgatgtagccgatgccgagcagatc
gaaggcatcattgcaacgttcaacaacatgggcattcaggtctacgacgcagcccccgct
gccgaagacctgctcatgtcggacaacgtcgcctccacggtggacgaggacgtcgccgag
gaagaagccgagcaggcactgtcgaccgtcgactccgaattcggccgcacgaccgaccct
gtgcgcatgtacatgcgtgaaatgggcaccgtcgagctgctgacgcgtgagggcgaaatc
gagatcgccaagcgtatcgaggacggcctcaagcacatggttctggccattgctgcgtgc
ccgaccaccatcgccgaaatgatcgacattgccgacaaggtgatccgcgaggagatgcgt
atcgatgaaatcgtcgatgccgtgatcgacccgaacgcgccgaccgccgaagaaaccgcc
gcagcggcagccgaggcagctgaagaaagcgccgacagcgacagcgacgattcggacgac
aacgacaacgacgacgacagcgacgacgacagcgacggcgacagcgaaggcgcagccaat
gcagcgtcgctgctgcagctgaagaccgatgcgctggcccgcttcgaagccatccgcggc
cactacgagcagatgatgaaggtgctcgcggacaaaggctcgcaggacaaggcttacctt
gagtaccagcagctgatctctgaggaactgatcaacatccgctttaccgcgaagtcgatc
gagcgtctgtgtgactccgttcgccgcatggttgagcaggtgcgtggccacgagcgtcac
attctgcagctgtgcgtcaatcgcgcaggcatgccgcgtcagcacttcatcaagatcttc
cctggtcacgaaaccgactccgactggatcgacagcgagctcgcctcgaacaagaactat
gtcgacgccctgtcgcgcgtacatccggcgatcaccgaagaacaggcgaagctgctcgac
ctgcaggacaagatcggcatcccgctgaaggagctgaaggacatcaaccgtcagatgtcc
accggcgaagcgaagatgcgccgcgccaagcgcgagatgaccgaagccaacctgcgcctc
gtgatctcgatcgccaagaagtacaccaaccgcggcctgcagttcctcgacctcattcag
gaaggcaacatcggcctgatgaaggcggtcgacaagttcgaataccgtcgcggttacaag
ttctcgacctacgccacctggtggattcgtcaggccatcacgcgttcgatcgccgaccag
gcacgcaccatccgtatcccggtgcacatgatcgaaacgatcaacaagatgaaccgcatc
agccgtcagatccttcaggaaaccggtgccgagcctgatccggcaacgctggccgaaaag
atggagatgccggaagacaagatccgcaagatcatgaagatctccaaggagccgatctcc
atggagacgccgatcggcgacgacgacgactcgcaccttggcgacttcatcgaggacacc
gcaaccctggcgcctgccgaagctgcgatgtactcgggtctgcgtgatgccaccggtgaa
gtgctcgactccctgacccagcgcgaagccaaagtgctgcgcatgcgtttcggcatcgag
atgaacaccgaccacacgctggaagaagtcggcaagcagttcgacgtcacccgcgagcgt
atccgtcagatagaagcgaaggcccttcgcaagctgcgtcacccgagccgttcggagaag
ctgcgcagcttcctcgacagcgacgcgtaa
DBGET
integrated database retrieval system
