Adelges cooleyi (spruce gall adelgid): 126833249 Help Entry 126833249         CDS       T09500                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism acoo  Adelges cooleyi (spruce gall adelgid) Pathway acoo03018   RNA degradation Brite KEGG Orthology (KO) [BR:acoo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     126833249  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acoo03019]     126833249 Enzymes [BR:acoo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      126833249 Messenger RNA biogenesis [BR:acoo03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      126833249   mRNA degradation factors    3'-5' decay     Ski complex      126833249 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT DEAD DEXQc_Suv3 Helicase_C Tim54 nSTAND3 Helicase_dom4_arc Intein_splicing Motif Other DBs NCBI-GeneID:  126833249 NCBI-ProteinID:  XP_050420420 LinkDB All DBs Position Unknown AA seq 1173 aa AA seqDB search MDNKIKFEVPGGLDSIMPNIKIDLLSYINCIENIPLYKSESTLPTRDINIKSLYAKSNVD VIPFELIPERDPKTGKILHFEEIISDPNDNADIDAMPCEKLNKNQSSDEYCGEINLEYDS DNLPVAPSMSKKLDVKKGKENITISTSASDTVLDDDWIEDFEGVWDDEIPEVTVEPEIAD PIPKDEINHIKNENFVLKISGTSERSLVKSQWVEELDISKPIDNFDELLPDPAYKWEFEL DTFQKQAVLKLEEKSSVFVAAHTSAGKTVIAEYAIALAKKQQLRCIYTSPIKALSNQKFR DFKKKFGDVGLITGDFQVKPEAQCLIVTTEILCSMLYSDSDKIKETEFVVLDEVHYVNDR DRGHIWEQILIMLPKRVKLVMLSATVTNVIDFADWIGRTRASKIYVVFTLYRPVPLEHYL YVGSNTSMDFQENMHLIRKADSGFLMHGYRRASEQFKKNHEVKKYHDSKNFKDQKPKWIN FLKFLDKNSMFPAVVFILSRKKCDLMAESLKNSVNFLLTSKESQANEYFFNKAIQKLKPE DRALPQVVLMKELLCQGIAVHHSGILPILKEIVEMQFQQSLVKCLFATETFAIGINMPAR TVVFESITKFDGIEKRNLAPAEYTQMAGRAGRRGHDKSGTVIIMATEQVINDRELTNMML GKSAKLESQFKVSYSIILNMFKKKNCETLEAILGSSFIEAARAKKKDEYTEELNYLKILD EKDQWQPTGQQELIIKEFYLAAKEYLDCRKEYWDNLYASADKKFSEVGRFVIITHQHHIG QLAIILSSNVKKVPREFRVLVLENKETKNEESDKPDSWYKFMYLSRKRRLCESPDVIHND HTILTIPSTSIMEITKFSENFDSSLIIKNWEMRQNERFKDAAISSPCQRAVKMLSENIIY LNRSEYNSSVLSIGDLGIDSFELHNAKLRMHALENQLYNIDLSDIIGFEEIFQRLYKYQT RKEKIAELEHQTSNKALQLYNEYINKVEVLKNLKYLDPRNEITTQKGSVASTMGSHELLI TELLLSNMFEEMKPEEIAAVLSCLVCESKSDFDVESIKEENLIKGMNIIKEKHNEIQSVE SIYLSNFERIDLNFNLVKVLHLWAQEKPFSEIMDITDIQEGIIVRCIVQLNEILTVIKNA AKTIGTNKISEKMQLVLDKIKRDIVFTPSLYME NT seq 3522 nt NT seq  +upstreamnt  +downstreamnt atggacaacaaaattaaatttgaggtacctggcggtttagactcaattatgccaaatatt aaaattgatctactgagttacatcaattgtattgaaaatataccattatataaaagcgaa tcgactctcccaacaagagatattaatataaaatctttatacgcaaagagtaacgtagat gttataccatttgaattaattcctgaaagagatcccaagactggtaaaatcttgcatttt gaagaaattattagtgatccaaatgataatgctgatatagatgctatgccctgtgaaaaa ctaaataaaaatcaaagttcagatgaatattgtggtgaaataaatttagaatatgattct gataatttaccagttgctcctagtatgtctaaaaagttagatgtgaaaaaaggtaaagaa aatattactattagtacaagtgcgagtgatacagtattagacgacgattggatagaagat tttgaaggtgtttgggatgatgaaataccagaagtaactgtagaaccagaaatcgctgat cctattccaaaagatgaaattaatcatattaaaaatgaaaattttgtattgaaaatatct ggaacatctgaaaggtctttggtcaaatctcagtgggtggaggaattggatatttctaag cctattgataattttgatgaacttttacccgatcccgcatataagtgggaatttgaacta gatacgtttcaaaaacaggcagtattaaaactggaagaaaagagtagtgttttcgttgca gctcatacgtctgctggtaaaactgttatagctgaatatgctattgcacttgcaaaaaaa cagcaattaagatgtatttacacatctccaataaaagcattgtccaatcaaaaatttcga gattttaaaaaaaagttcggagacgttgggctaataactggtgattttcaagttaaacca gaagctcaatgtttgattgtgacgacagaaattttatgctcaatgttgtatagtgattca gataaaattaaagaaactgaatttgtagttctcgacgaagtccactatgttaatgatagg gatagaggacacatatgggaacaaattttaataatgcttcctaaacgtgtgaagctggta atgttgagtgctaccgtgacaaatgttattgattttgccgattggattggccgaactcga gcttctaaaatttatgtcgtgtttactttatacagaccagttcctctagaacattatctc tatgtcggttcaaatactagtatggattttcaagaaaacatgcatttaatacggaaagct gatagtggttttcttatgcacggttatcggagagcttcagaacagtttaaaaaaaatcat gaagtaaaaaaataccatgattcaaaaaatttcaaagatcaaaagcccaagtggataaac tttttaaaatttcttgataaaaatagtatgtttccggcagtagtatttatattgtccaga aaaaaatgtgacctgatggcagaatcgcttaaaaattctgtcaattttcttttgaccagt aaagaatcacaagccaatgaatatttttttaataaagctattcaaaaattaaaacctgaa gatcgagcgttacctcaggttgttctgatgaaagagttactgtgtcaaggaatagcagtt caccacagcggtatactacccattctaaaagaaatagtcgaaatgcaatttcaacaaagt ttagtcaaatgtttgtttgccaccgaaacatttgccattggcatcaacatgccagcaaga acagttgtctttgagtctattactaaatttgacggtatagaaaaacgtaatctggctcct gctgaatatactcaaatggctggacgggctggtcgtcgtggtcatgataaaagtggcaca gtaataataatggcaactgaacaagtaattaatgacagagaactgaccaacatgatgttg ggaaaatcagcaaaactagaatctcaatttaaagttagctattccattatattgaatatg ttcaagaagaaaaattgtgaaacactagaagcaattctcggtagtagctttattgaagct gctagagcaaaaaaaaaagatgaatacacagaagaattaaattatttgaaaatattagat gaaaaagatcaatggcaaccaacgggacaacaagaattgattattaaagagttttatctt gctgccaaagaatatttagactgcaggaaagaatattgggataacctgtatgcttcagct gacaaaaagttcagtgaggtcggaaggtttgtcatcataacacatcaacaccacattgga caattagctattatattatcgagtaatgtcaaaaaagttccgagagagtttcgtgtattg gtattagaaaataaagaaaccaaaaacgaagagtcagataaaccagattcttggtacaaa tttatgtacttgtctcgaaaaagaagattatgtgaatcacctgatgtaatacacaacgac catactatactgactataccatcaacttctattatggaaattacaaaattttcggaaaat tttgatagtagtcttatcataaaaaattgggaaatgaggcagaatgaacgtttcaaagat gcagccatttcaagtccctgtcaacgagctgtcaaaatgttatcagaaaacattatatac ttaaatcggtccgagtacaatagttctgtgctaagtataggagatttaggaattgattca tttgagttgcataatgcaaaactacgtatgcatgctttagaaaatcaattatataatatc gatttgtcggacataattgggtttgaagaaattttccaaagattgtataaatatcaaaca cggaaagaaaaaattgcagagttagaacatcaaacgtcaaataaagcattacaactctat aatgaatatatcaacaaagtagaagtacttaaaaaccttaagtatttggatcctcgtaat gaaattactactcaaaaaggaagtgtagccagtactatgggatcacatgaactcttaatt accgaacttcttttaagtaatatgtttgaagaaatgaagccagaagaaatcgctgcagtt ctctcgtgtctagtttgtgaatcaaaatcagattttgatgttgaatctattaaagaagaa aacttaataaaaggtatgaacataataaaagaaaaacacaatgaaattcagtcagtcgag tctatatatttaagcaattttgaacgtattgacctcaactttaatctggtcaaagtgtta catttatgggcccaagaaaagcctttctctgaaataatggatataacggatattcaagaa ggaattatagttcgctgcattgttcaactaaatgaaatattaacagtcatcaaaaatgcc gcaaaaacaattggaacgaataaaattagcgaaaaaatgcaacttgtgctagataaaatt aaaagagatattgtattcactccctcattatacatggaataa

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