Adelges cooleyi (spruce gall adelgid): 126833627
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Entry
126833627 CDS
T09500
Name
(RefSeq) splicing factor 3B subunit 3-like isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126833627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acoo03021
]
126833627
03041 Spliceosome [BR:
acoo03041
]
126833627
03036 Chromosome and associated proteins [BR:
acoo03036
]
126833627
Transcription machinery [BR:
acoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126833627
Spliceosome [BR:
acoo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126833627
Complex B
126833627
Complex C
U2 SnRNP specific factors
126833627
Chromosome and associated proteins [BR:
acoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
126833627
TFTC complex
126833627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
126833627
NCBI-ProteinID:
XP_050421021
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MYLYNMTLQRGSAITNAIHGNFSGRKAQEILISHGKSLELMRPDTNTGKVHTLLTVEVFG
IVRALMSFRQSGGTKDYIVVGTDSGRIVILEYLPLKNILDKVHQETFGKSGCRRIVPGQY
LAIDPKGRAIMIGAVEKQKLVYIPNRDSEARLTISSPLEANKSNTFVYHMVGIDVAFDNP
VFACLEIDYEEADSDSSGNAVQSTCQTLTFYEVDFGLNHVVRKYSEALEEHANSLIAVPG
DKDGPGGVLICSENYITYKNQGEQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLVQTEQGDIFKVTLETNEEFVTEIRLKYFDTVAVASAMCVLKTGFLFIASEFGNHYLYQ
IANLGDDDDEPEFSSAMPLEEGDTFFFAPRLLRNLVLVDEMDSLSPIMACQVADLAAEDT
PQLYMACGRGPRSTLRVLRHGLEVSEMAISELPGNPNAVWTVKSRAEELYDAYIVVSFSN
ATLVLSIGETVEEVSDSGFLGTTPTLSCSPLGDDAVVQIYPNGVRHIRSDRRMHDWKAPE
KKKIVKCAANQRQVVIALGGGELIYFEMDPTGHLNEHKDRKEMNTDVLCMALANAPSGEQ
MSRFLAVGLIDETVRIISLDTGDCLTQLKMQAIPAMPESLCIVEMGVSDVGSSDEPGMNS
LSMLYLNIGLRNGVLLRTVLDSVTGEMADTRARYLGGKPVKLFKIQTRGNEAVLAMSSRS
WLSYYYQNRFHLTPLSYDSLEYASGFSSEQCAEGIVAISNNTLRILALEKLGAVFNQVSF
PVEYTPRKFIVHPDSAHLIVVETEHNAYTEQTKRQRRVQMAEEMQEAAGEEEQELALEMA
EAFLNEDLPENVFGAPKAGSGMWASLIRLFNPGQGVTEAVYRFPQNEAIMSVALVRFSTY
PDTQYVLFGVANELYLNPRHVTCGYIYTYKVNPTCTSLEFVHKTIVDNVPTAICGFQGRV
LIGVGRILRIYDIGKKKLLRKCENKQISMSIVGIRAMGLRIYVSDVQESVYMVQYKRSEN
QLVIFADDTQPRYTTAIEILDYNTVAAADKFGNITILRLAVSISDEIEDDPTGNKNLWDR
GLLNGASQKADFIANFHVGEICTSLQKATLIPGGSESLVYSTISGTIGVLVPFTAHEEQD
FFQHLEMHMRSENPPLCGRDHLSYRSYYFPVKNVCDGDLCEQYNSIDIAKQKSIAADLDK
TPAEVSKRLEDMRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtataatatgacgttacaacgaggtagcgccatcacgaatgctatccatggt
aattttagtggccgaaaggctcaagaaatattaatatctcatggaaaatcactagagctg
atgagacctgatacgaacactgggaaagtccatacattacttacagttgaagtgtttgga
attgttcgagctctgatgagcttcagacagtctggcggaaccaaagattatattgtagtc
ggaactgattccggaagaatagtcattttggagtatttgccgttgaaaaatattcttgac
aaagtacatcaggaaacattcggaaaaagcggttgcagacgtatcgtaccgggacaatat
ttagcgattgacccaaagggacgagcgattatgattggtgcagtagaaaaacaaaagctg
gtgtacattcccaacagagactccgaagctagactgactatatcgtcgcctttagaagcc
aacaagagtaatacattcgtttatcatatggttggaatcgatgtcgcgtttgataaccct
gtttttgcttgtcttgagattgactatgaggaagccgattccgattcttcgggcaatgct
gtccaatctacctgtcaaacactgacattttacgaagttgatttcggattaaaccacgtg
gtcagaaaatatagtgaagctttagaagaacatgccaattcactaattgccgtccctggt
gacaaggatgggcctggtggagtgttgatatgctcggaaaattatataacatataaaaat
caaggcgaacaacctgatattcgttgtccgattcctcgtagacgaaatgatttagatgat
ccggaacgaggaatgatctttgtttgcagcgctacgcacaaaaccaagtcaatgtttttc
ttcctggtacaaaccgaacaaggggacatcttcaaggtgacactggaaaccaatgaagaa
tttgtcacagaaatacgactgaaatatttcgatacagttgctgtagcttcggcaatgtgt
gttttgaaaacaggatttttatttatagcgtccgagtttggaaatcattatttatatcaa
atagcaaatttgggtgatgatgacgacgaacccgaatttagttctgccatgcccttggag
gaaggagatacgttttttttcgctcctcgactattgagaaatttagtattagtcgatgaa
atggattctttgtcgcccataatggcatgtcaagttgcagatttagccgccgaagacact
cctcagttatacatggcgtgcggacgaggtccacgatccacgctgagagttttgagacac
ggtcttgaagtgtccgaaatggccatttcagaattgccaggaaatccgaatgcagtttgg
actgttaaaagtagagcggaggaattgtatgatgcgtatatcgttgtgtcattctcaaat
gctactttagttttgtcgatcggcgaaacagtagaagaagtttcagattctggatttcta
gggacaacacccacgctatcttgctctccgttaggtgacgatgcggttgtacagatttat
cccaatggtgtacgtcatatacgatcggatagacgaatgcacgactggaaagctccagaa
aagaagaaaatagtcaaatgtgcggccaatcagcggcaagtggttatcgcgttgggtggt
ggcgaactaatatactttgaaatggatccgactggacatttaaacgaacacaaagaccgt
aaggaaatgaacactgatgttctttgtatggcgttggcaaatgccccgtccggagaacaa
atgtctcggtttttggccgttggattgattgacgaaacagttcgcattatttctttggat
acgggcgattgcttgactcaattgaaaatgcaagctattcccgccatgcccgaatcactg
tgcatcgtagaaatgggtgtgagcgatgttgggtcgtctgatgagcccggaatgaattcc
ttgtcaatgttgtacctgaacattggcttgcgaaatggagtactgttgcgtacggtcttg
gacagcgttaccggggaaatggctgacactagagcccgttacttgggaggaaaaccggtg
aaactatttaagatccaaactcgtggcaatgaggctgtgcttgcgatgtctagtcgatct
tggctaagctattattaccaaaaccgttttcatctaacgcccctgtcgtacgacagtctg
gaatacgcttctggtttctcatctgaacaatgcgctgaaggcatagttgctatatctaat
aacaccctgcgtattttggcattggaaaaacttggcgccgtattcaatcaagtgtccttt
ccggttgagtacactcctagaaaattcattgtacatcccgactcggctcacttgattgtt
gtcgaaaccgaacacaatgcatacacagaacagacaaagagacagagacgagttcagatg
gccgaagaaatgcaagaagccgccggagaggaggaacaagaattggccttggaaatggcc
gaagcgttcttgaacgaagatttaccggaaaatgttttcggcgctcccaaagctggttct
ggaatgtgggcttcgttgattaggttgtttaatcctggccaaggtgttaccgaagcagtt
tatcgttttccacaaaacgaagcgattatgagtgttgccttagtgcggttttcaacttat
ccagatacacagtatgtacttttcggtgttgcaaacgagctttatttaaatccaagacac
gtgacctgtggctatatttacacatacaaagtgaacccgacttgtacgtctttagaattt
gtacacaagacgattgttgataacgtgccaacggcgatttgtggattccaaggccgcgtt
ttgataggcgtcggccgcatactacgtatatacgatattggaaaaaaaaaattgttgcga
aaatgtgaaaacaaacaaatttccatgtcgattgtcggaatccgagcaatggggttgaga
atttatgttagtgacgtccaagaaagtgtgtatatggtgcaatacaaaagatctgaaaat
caattggttatatttgccgacgatacacagccacgttatactacggctattgagatactc
gactacaacacagtagccgcggctgacaagtttggaaatattacgattctacggttagct
gtatcaatatctgacgaaattgaagacgatccgaccggaaataaaaatctttgggatcgc
gggttgcttaacggtgcttctcagaaagcagatttcatagccaatttccatgttggagaa
atatgtacatcgctacaaaaagctactcttataccgggaggttctgaatcattagtttac
tcgacgatatcgggtacgatcggggttttggtgccgtttacagctcacgaagaacaagac
ttctttcaacaccttgaaatgcacatgagatcggaaaatccacctttgtgtggccgtgac
catttatcctaccgatcctattattttcctgtaaagaacgtatgtgacggagatttatgt
gaacagtacaactctattgacattgctaaacagaagagcattgctgccgatctcgataaa
acgccagcggaagtgtctaagcgtctcgaagacatgcgaacaagatacgcattttga
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