Adelges cooleyi (spruce gall adelgid): 126833974
Help
Entry
126833974 CDS
T09500
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
acoo
Adelges cooleyi (spruce gall adelgid)
Pathway
acoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126833974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acoo03041
]
126833974
Spliceosome [BR:
acoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
126833974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_DCAF4
PRP4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
eIF2A
WD40_like
Beta-prop_HPS5
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_WDR75_2nd
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
126833974
NCBI-ProteinID:
XP_050421556
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDDEEITYVKKPKTIHYGSLEDQERARLAQLAALDDDGEQKTSSGNINISNEYFDLEDA
MSKDKQALLEEFERKKKARQVQVSTDDDDVKKSLRKLGQAICLFGEGPAERRNRLRELLS
RVGEDVVIKKPEEEREKRQQIKDQDTTWYHEGPPSLLDSRLAIAEYSLLRSHFRLEKLRE
EASIPESTLTARLQDLHKYTTSLSIYCSQIGDTRPISYCRFSPDSQFIATSSWSGLCKLW
SVPDCNLVKTFRGHNCNVCCITFNPQANTEENVCDLVSCASDGSVKLWSMNSKKEEPVAD
LEGHAPFRVSRAIFHPSGRFLGTCCFDNSWRLWDLEQAEEVLHQEGHCKPVYCMSFQCDG
SIVATGGLDAFGRVWDLRTGRCIMFMEGHLKSVYSIDFSPNGYQLATGSEDNTCRIWDVR
KRACLYTIPAHMSLVSGLRYQPEGHFIVTSSYDNTIKIWANKTWQMLKTLSGHDNKIMGV
DISSDSKYIASSSYDRTFKLWAPEYST
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgacgaagaaattacttacgttaaaaaacccaaaacgatccattatggttct
ttagaggatcaagaacgtgctcgtttagctcagttggccgcactcgatgatgatggcgag
caaaaaacttccagtggaaatattaatatttccaatgagtactttgatttggaggatgct
atgtccaaagacaaacaagcattgttagaagaatttgaacgtaaaaaaaaagctcgacaa
gtacaagtgtctacagacgacgacgatgttaaaaaaagtcttaggaaacttggtcaagct
atttgtttatttggagaaggtccagccgaaagaagaaataggttacgagaattactgtcc
agagtgggagaagacgttgttataaaaaaacctgaagaagaaagagaaaaacgacaacaa
atcaaagatcaagatacaacgtggtatcatgaaggaccgccatcgttattagattctcgg
ttagctatagcagaatactcattattgagatctcattttcgactagaaaaattgagagaa
gaagctagtatacctgagtctactcttacggctcgtttgcaagacttacataaatatact
acgtcgttatcgatatattgtagtcaaattggcgatactaggccaatatcttactgtcga
tttagcccagattcacagtttatagctacatcatcttggagtggtttgtgtaagctttgg
tcagttccagactgtaacttagtcaaaacattcagagggcacaactgtaatgtttgttgt
ataacatttaatccacaggctaatactgaagaaaatgtgtgtgatcttgtgtcgtgtgct
agcgatgggtcggttaaactttggtccatgaatagcaaaaaagaagaacccgtagcagat
ttggaaggtcatgctccgtttagagtgtcacgggctatttttcatccttccggtagattt
ttgggaacttgttgttttgataattcgtggcgtttatgggatttagaacaagcagaagaa
gtactccaccaggaaggtcattgtaagccagtttattgcatgtcgtttcaatgtgatgga
tcaatcgttgctactggtggattggatgcatttggtcgtgtttgggacttgcgaacaggc
agatgtattatgtttatggaaggccatttaaaatcagtctatagcatagacttttcccca
aatggttatcaattagctactggaagcgaagataacacatgccgtatttgggacgtgaga
aagagagcttgtctgtacacaattcctgcacatatgagtcttgtatctggactcaggtat
caaccagaaggtcatttcattgttacatcgtcttacgataacacaattaagatttgggca
aataaaacgtggcaaatgttaaaaacattatctggacacgataataaaattatgggtgta
gacatatcttcagattcaaaatacatagcgtcttcatcctacgataggacttttaaactg
tgggcacctgaatattcaacttag
DBGET
integrated database retrieval system
